Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q8VDP2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q8VDP2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q8VDP2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Q8VDP2 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q8VDP2 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q8VDP2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q8VDP2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q8VDP2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Q8VDP2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q8VDP2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q8VDP2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q8VDP2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Q8VDP2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q8VDP2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q8VDP2 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q8VDP2 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q8VDP2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q8VDP2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q8VDP2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.7■□□□□ 0.58
Q8VDP2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q8VDP2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q8VDP2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q8VDP2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q8VDP2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q8VDP2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q8VDP2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q8VDP2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q8VDP2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q8VDP2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q8VDP2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q8VDP2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q8VDP2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Q8VDP2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q8VDP2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q8VDP2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q8VDP2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.69■□□□□ 0.58
Q8VDP2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.69■□□□□ 0.58
Q8VDP2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.69■□□□□ 0.58
Q8VDP2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.69■□□□□ 0.58
Q8VDP2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q8VDP2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q8VDP2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q8VDP2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q8VDP2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q8VDP2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q8VDP2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q8VDP2 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q8VDP2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.68■□□□□ 0.58
Q8VDP2 Gm12366-201ENSMUST00000121722 873 ntBASIC18.68■□□□□ 0.58
Q8VDP2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.68■□□□□ 0.58
Q8VDP2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.68■□□□□ 0.58
Q8VDP2 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q8VDP2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q8VDP2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.68■□□□□ 0.58
Q8VDP2 Gm5786-201ENSMUST00000085368 882 ntBASIC18.68■□□□□ 0.58
Q8VDP2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Q8VDP2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Q8VDP2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Q8VDP2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Q8VDP2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Q8VDP2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q8VDP2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q8VDP2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q8VDP2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q8VDP2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Q8VDP2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Q8VDP2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q8VDP2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q8VDP2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q8VDP2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q8VDP2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Q8VDP2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q8VDP2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Q8VDP2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Q8VDP2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q8VDP2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Q8VDP2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.67■□□□□ 0.58
Q8VDP2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Q8VDP2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q8VDP2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.67■□□□□ 0.58
Q8VDP2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Q8VDP2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Q8VDP2 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.66■□□□□ 0.58
Q8VDP2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q8VDP2 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q8VDP2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q8VDP2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.66■□□□□ 0.58
Q8VDP2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q8VDP2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q8VDP2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q8VDP2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Q8VDP2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
Q8VDP2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Q8VDP2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Q8VDP2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q8VDP2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Q8VDP2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.66■□□□□ 0.58
Q8VDP2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q8VDP2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms