Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.37■■□□□ 1.01
Usp6nlQ80XC3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Usp6nlQ80XC3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Usp6nlQ80XC3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Usp6nlQ80XC3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Usp6nlQ80XC3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp6nlQ80XC3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp6nlQ80XC3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp6nlQ80XC3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.36■■□□□ 1.01
Usp6nlQ80XC3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Usp6nlQ80XC3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.36■■□□□ 1.01
Usp6nlQ80XC3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.36■■□□□ 1.01
Usp6nlQ80XC3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp6nlQ80XC3 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.36■■□□□ 1.01
Usp6nlQ80XC3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp6nlQ80XC3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp6nlQ80XC3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp6nlQ80XC3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp6nlQ80XC3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp6nlQ80XC3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.36■■□□□ 1.01
Usp6nlQ80XC3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp6nlQ80XC3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Usp6nlQ80XC3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Usp6nlQ80XC3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Usp6nlQ80XC3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Usp6nlQ80XC3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Usp6nlQ80XC3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Usp6nlQ80XC3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.35■■□□□ 1.01
Usp6nlQ80XC3 Gm10252-201ENSMUST00000209541 832 ntBASIC21.35■■□□□ 1.01
Usp6nlQ80XC3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Usp6nlQ80XC3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Usp6nlQ80XC3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp6nlQ80XC3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp6nlQ80XC3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp6nlQ80XC3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp6nlQ80XC3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Usp6nlQ80XC3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp6nlQ80XC3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp6nlQ80XC3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Usp6nlQ80XC3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Usp6nlQ80XC3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Usp6nlQ80XC3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Usp6nlQ80XC3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.33■■□□□ 1.01
Usp6nlQ80XC3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Usp6nlQ80XC3 Gm7860-201ENSMUST00000121190 879 ntBASIC21.33■■□□□ 1.01
Usp6nlQ80XC3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.33■■□□□ 1.01
Usp6nlQ80XC3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Usp6nlQ80XC3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Usp6nlQ80XC3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Usp6nlQ80XC3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Usp6nlQ80XC3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Usp6nlQ80XC3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Usp6nlQ80XC3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Usp6nlQ80XC3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Usp6nlQ80XC3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Usp6nlQ80XC3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.32■■□□□ 1
Usp6nlQ80XC3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Usp6nlQ80XC3 Gm13168-201ENSMUST00000121771 632 ntBASIC21.32■■□□□ 1
Usp6nlQ80XC3 Gm37856-201ENSMUST00000191634 999 ntBASIC21.32■■□□□ 1
Usp6nlQ80XC3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.32■■□□□ 1
Usp6nlQ80XC3 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.32■■□□□ 1
Usp6nlQ80XC3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Usp6nlQ80XC3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Usp6nlQ80XC3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Usp6nlQ80XC3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Usp6nlQ80XC3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Usp6nlQ80XC3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Usp6nlQ80XC3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Usp6nlQ80XC3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.31■■□□□ 1
Usp6nlQ80XC3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Usp6nlQ80XC3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Usp6nlQ80XC3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.31■■□□□ 1
Usp6nlQ80XC3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.31■■□□□ 1
Usp6nlQ80XC3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.31■■□□□ 1
Usp6nlQ80XC3 Gm26524-201ENSMUST00000192339 390 ntBASIC21.31■■□□□ 1
Usp6nlQ80XC3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
Usp6nlQ80XC3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Usp6nlQ80XC3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.31■■□□□ 1
Usp6nlQ80XC3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.31■■□□□ 1
Usp6nlQ80XC3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Usp6nlQ80XC3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Usp6nlQ80XC3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Usp6nlQ80XC3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Usp6nlQ80XC3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Usp6nlQ80XC3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.3■■□□□ 1
Usp6nlQ80XC3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Usp6nlQ80XC3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.3■■□□□ 1
Usp6nlQ80XC3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.3■■□□□ 1
Usp6nlQ80XC3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.3■■□□□ 1
Usp6nlQ80XC3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Usp6nlQ80XC3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Usp6nlQ80XC3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Usp6nlQ80XC3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.29■■□□□ 1
Usp6nlQ80XC3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Usp6nlQ80XC3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
Usp6nlQ80XC3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usp6nlQ80XC3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usp6nlQ80XC3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usp6nlQ80XC3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.29■■□□□ 1
Usp6nlQ80XC3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms