Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Kdm3aQ6PCM1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Kdm3aQ6PCM1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Kdm3aQ6PCM1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Kdm3aQ6PCM1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC23.36■■□□□ 1.33
Kdm3aQ6PCM1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Kdm3aQ6PCM1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
Kdm3aQ6PCM1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Kdm3aQ6PCM1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Kdm3aQ6PCM1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Kdm3aQ6PCM1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Kdm3aQ6PCM1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Kdm3aQ6PCM1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Kdm3aQ6PCM1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC23.36■■□□□ 1.33
Kdm3aQ6PCM1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Kdm3aQ6PCM1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Kdm3aQ6PCM1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Kdm3aQ6PCM1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Kdm3aQ6PCM1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Kdm3aQ6PCM1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Kdm3aQ6PCM1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Kdm3aQ6PCM1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC23.35■■□□□ 1.33
Kdm3aQ6PCM1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Kdm3aQ6PCM1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Kdm3aQ6PCM1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Kdm3aQ6PCM1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Kdm3aQ6PCM1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Kdm3aQ6PCM1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Kdm3aQ6PCM1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC23.34■■□□□ 1.33
Kdm3aQ6PCM1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC23.34■■□□□ 1.33
Kdm3aQ6PCM1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Kdm3aQ6PCM1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Kdm3aQ6PCM1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC23.34■■□□□ 1.33
Kdm3aQ6PCM1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Kdm3aQ6PCM1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Kdm3aQ6PCM1 Gm13534-201ENSMUST00000121169 513 ntBASIC23.33■■□□□ 1.33
Kdm3aQ6PCM1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Kdm3aQ6PCM1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC23.33■■□□□ 1.33
Kdm3aQ6PCM1 Gm32699-201ENSMUST00000221728 1988 ntBASIC23.33■■□□□ 1.33
Kdm3aQ6PCM1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Kdm3aQ6PCM1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Kdm3aQ6PCM1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Kdm3aQ6PCM1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Kdm3aQ6PCM1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Kdm3aQ6PCM1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Kdm3aQ6PCM1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
Kdm3aQ6PCM1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Kdm3aQ6PCM1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Kdm3aQ6PCM1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Kdm3aQ6PCM1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC23.32■■□□□ 1.32
Kdm3aQ6PCM1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Kdm3aQ6PCM1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Kdm3aQ6PCM1 Gm27032-201ENSMUST00000183124 1116 ntBASIC23.32■■□□□ 1.32
Kdm3aQ6PCM1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC23.32■■□□□ 1.32
Kdm3aQ6PCM1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Kdm3aQ6PCM1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Kdm3aQ6PCM1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Kdm3aQ6PCM1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Kdm3aQ6PCM1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Kdm3aQ6PCM1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Kdm3aQ6PCM1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Kdm3aQ6PCM1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Kdm3aQ6PCM1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
Kdm3aQ6PCM1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Kdm3aQ6PCM1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC23.31■■□□□ 1.32
Kdm3aQ6PCM1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC23.31■■□□□ 1.32
Kdm3aQ6PCM1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Kdm3aQ6PCM1 Gm34220-201ENSMUST00000223001 2709 ntBASIC23.3■■□□□ 1.32
Kdm3aQ6PCM1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Kdm3aQ6PCM1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Kdm3aQ6PCM1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Kdm3aQ6PCM1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Kdm3aQ6PCM1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Kdm3aQ6PCM1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Kdm3aQ6PCM1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Kdm3aQ6PCM1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Kdm3aQ6PCM1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Kdm3aQ6PCM1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Kdm3aQ6PCM1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Kdm3aQ6PCM1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC23.29■■□□□ 1.32
Kdm3aQ6PCM1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Kdm3aQ6PCM1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Kdm3aQ6PCM1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Kdm3aQ6PCM1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Kdm3aQ6PCM1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Kdm3aQ6PCM1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Kdm3aQ6PCM1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Kdm3aQ6PCM1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Kdm3aQ6PCM1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Kdm3aQ6PCM1 Gm12933-201ENSMUST00000120203 872 ntBASIC23.28■■□□□ 1.32
Kdm3aQ6PCM1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Kdm3aQ6PCM1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Kdm3aQ6PCM1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Kdm3aQ6PCM1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Kdm3aQ6PCM1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Kdm3aQ6PCM1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Kdm3aQ6PCM1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC23.27■■□□□ 1.32
Kdm3aQ6PCM1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Kdm3aQ6PCM1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Kdm3aQ6PCM1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC23.27■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms