Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
R3hdm4Q4VBF2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
R3hdm4Q4VBF2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
R3hdm4Q4VBF2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
R3hdm4Q4VBF2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
R3hdm4Q4VBF2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
R3hdm4Q4VBF2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
R3hdm4Q4VBF2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
R3hdm4Q4VBF2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
R3hdm4Q4VBF2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
R3hdm4Q4VBF2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
R3hdm4Q4VBF2 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.87■□□□□ 0.93
R3hdm4Q4VBF2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
R3hdm4Q4VBF2 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.87■□□□□ 0.93
R3hdm4Q4VBF2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
R3hdm4Q4VBF2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
R3hdm4Q4VBF2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.86■□□□□ 0.93
R3hdm4Q4VBF2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
R3hdm4Q4VBF2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
R3hdm4Q4VBF2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
R3hdm4Q4VBF2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.86■□□□□ 0.93
R3hdm4Q4VBF2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
R3hdm4Q4VBF2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.86■□□□□ 0.93
R3hdm4Q4VBF2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.86■□□□□ 0.93
R3hdm4Q4VBF2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
R3hdm4Q4VBF2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
R3hdm4Q4VBF2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
R3hdm4Q4VBF2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
R3hdm4Q4VBF2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
R3hdm4Q4VBF2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
R3hdm4Q4VBF2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
R3hdm4Q4VBF2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
R3hdm4Q4VBF2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
R3hdm4Q4VBF2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
R3hdm4Q4VBF2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.85■□□□□ 0.93
R3hdm4Q4VBF2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
R3hdm4Q4VBF2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
R3hdm4Q4VBF2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
R3hdm4Q4VBF2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
R3hdm4Q4VBF2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.85■□□□□ 0.93
R3hdm4Q4VBF2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
R3hdm4Q4VBF2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
R3hdm4Q4VBF2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
R3hdm4Q4VBF2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
R3hdm4Q4VBF2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.84■□□□□ 0.93
R3hdm4Q4VBF2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
R3hdm4Q4VBF2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.84■□□□□ 0.93
R3hdm4Q4VBF2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
R3hdm4Q4VBF2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
R3hdm4Q4VBF2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
R3hdm4Q4VBF2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
R3hdm4Q4VBF2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
R3hdm4Q4VBF2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
R3hdm4Q4VBF2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
R3hdm4Q4VBF2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
R3hdm4Q4VBF2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.83■□□□□ 0.93
R3hdm4Q4VBF2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
R3hdm4Q4VBF2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
R3hdm4Q4VBF2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
R3hdm4Q4VBF2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
R3hdm4Q4VBF2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
R3hdm4Q4VBF2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
R3hdm4Q4VBF2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
R3hdm4Q4VBF2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
R3hdm4Q4VBF2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
R3hdm4Q4VBF2 Gm10493-201ENSMUST00000097270 612 ntBASIC20.82■□□□□ 0.92
R3hdm4Q4VBF2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
R3hdm4Q4VBF2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
R3hdm4Q4VBF2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
R3hdm4Q4VBF2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
R3hdm4Q4VBF2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
R3hdm4Q4VBF2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
R3hdm4Q4VBF2 Gm18284-201ENSMUST00000172604 624 ntBASIC20.81■□□□□ 0.92
R3hdm4Q4VBF2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.81■□□□□ 0.92
R3hdm4Q4VBF2 Gm9988-201ENSMUST00000069786 435 ntBASIC20.81■□□□□ 0.92
R3hdm4Q4VBF2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
R3hdm4Q4VBF2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
R3hdm4Q4VBF2 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.8■□□□□ 0.92
R3hdm4Q4VBF2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
R3hdm4Q4VBF2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
R3hdm4Q4VBF2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
R3hdm4Q4VBF2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
R3hdm4Q4VBF2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
R3hdm4Q4VBF2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
R3hdm4Q4VBF2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.8■□□□□ 0.92
R3hdm4Q4VBF2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
R3hdm4Q4VBF2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
R3hdm4Q4VBF2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
R3hdm4Q4VBF2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
R3hdm4Q4VBF2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
R3hdm4Q4VBF2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
R3hdm4Q4VBF2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
R3hdm4Q4VBF2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
R3hdm4Q4VBF2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
R3hdm4Q4VBF2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
R3hdm4Q4VBF2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
R3hdm4Q4VBF2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.79■□□□□ 0.92
R3hdm4Q4VBF2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
R3hdm4Q4VBF2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
R3hdm4Q4VBF2 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms