Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Uspl1Q3ULM6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
Uspl1Q3ULM6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Uspl1Q3ULM6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Uspl1Q3ULM6 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Uspl1Q3ULM6 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC25.07■■□□□ 1.6
Uspl1Q3ULM6 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Uspl1Q3ULM6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC25.07■■□□□ 1.6
Uspl1Q3ULM6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
Uspl1Q3ULM6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Uspl1Q3ULM6 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Uspl1Q3ULM6 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC25.06■■□□□ 1.6
Uspl1Q3ULM6 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
Uspl1Q3ULM6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Uspl1Q3ULM6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Uspl1Q3ULM6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Uspl1Q3ULM6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC25.06■■□□□ 1.6
Uspl1Q3ULM6 AC124603.1-201ENSMUST00000223843 308 ntBASIC25.06■■□□□ 1.6
Uspl1Q3ULM6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Uspl1Q3ULM6 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Uspl1Q3ULM6 Gm10493-201ENSMUST00000097270 612 ntBASIC25.06■■□□□ 1.6
Uspl1Q3ULM6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Uspl1Q3ULM6 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Uspl1Q3ULM6 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Uspl1Q3ULM6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Uspl1Q3ULM6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC25.05■■□□□ 1.6
Uspl1Q3ULM6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Uspl1Q3ULM6 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Uspl1Q3ULM6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Uspl1Q3ULM6 Gm7860-201ENSMUST00000121190 879 ntBASIC25.04■■□□□ 1.6
Uspl1Q3ULM6 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC25.04■■□□□ 1.6
Uspl1Q3ULM6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Uspl1Q3ULM6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Uspl1Q3ULM6 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Uspl1Q3ULM6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Uspl1Q3ULM6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Uspl1Q3ULM6 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC25.04■■□□□ 1.6
Uspl1Q3ULM6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
Uspl1Q3ULM6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC25.03■■□□□ 1.6
Uspl1Q3ULM6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Uspl1Q3ULM6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Uspl1Q3ULM6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC25.03■■□□□ 1.6
Uspl1Q3ULM6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Uspl1Q3ULM6 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
Uspl1Q3ULM6 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Uspl1Q3ULM6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Uspl1Q3ULM6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
Uspl1Q3ULM6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC25.03■■□□□ 1.6
Uspl1Q3ULM6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Uspl1Q3ULM6 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Uspl1Q3ULM6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Uspl1Q3ULM6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC25.02■■□□□ 1.6
Uspl1Q3ULM6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Uspl1Q3ULM6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC25.02■■□□□ 1.6
Uspl1Q3ULM6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Uspl1Q3ULM6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Uspl1Q3ULM6 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC25.02■■□□□ 1.6
Uspl1Q3ULM6 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Uspl1Q3ULM6 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Uspl1Q3ULM6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC25.01■■□□□ 1.59
Uspl1Q3ULM6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC25■■□□□ 1.59
Uspl1Q3ULM6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Uspl1Q3ULM6 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC25■■□□□ 1.59
Uspl1Q3ULM6 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Uspl1Q3ULM6 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Uspl1Q3ULM6 Gm38205-201ENSMUST00000192243 258 ntBASIC25■■□□□ 1.59
Uspl1Q3ULM6 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Uspl1Q3ULM6 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Uspl1Q3ULM6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC25■■□□□ 1.59
Uspl1Q3ULM6 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Uspl1Q3ULM6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC25■■□□□ 1.59
Uspl1Q3ULM6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
Uspl1Q3ULM6 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC24.99■■□□□ 1.59
Uspl1Q3ULM6 Gm18284-201ENSMUST00000172604 624 ntBASIC24.99■■□□□ 1.59
Uspl1Q3ULM6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Uspl1Q3ULM6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC24.99■■□□□ 1.59
Uspl1Q3ULM6 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC24.99■■□□□ 1.59
Uspl1Q3ULM6 Reep4-203ENSMUST00000226563 1444 ntBASIC24.99■■□□□ 1.59
Uspl1Q3ULM6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
Uspl1Q3ULM6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Uspl1Q3ULM6 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Uspl1Q3ULM6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Uspl1Q3ULM6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Uspl1Q3ULM6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Uspl1Q3ULM6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Uspl1Q3ULM6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Uspl1Q3ULM6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Uspl1Q3ULM6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Uspl1Q3ULM6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC24.98■■□□□ 1.59
Uspl1Q3ULM6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Uspl1Q3ULM6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Uspl1Q3ULM6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Uspl1Q3ULM6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Uspl1Q3ULM6 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC24.97■■□□□ 1.59
Uspl1Q3ULM6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC24.97■■□□□ 1.59
Uspl1Q3ULM6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Uspl1Q3ULM6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Uspl1Q3ULM6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Uspl1Q3ULM6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Uspl1Q3ULM6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms