Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col10a1Q05306 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Col10a1Q05306 Gm15039-201ENSMUST00000118914 875 ntBASIC17.78■□□□□ 0.44
Col10a1Q05306 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.78■□□□□ 0.44
Col10a1Q05306 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col10a1Q05306 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col10a1Q05306 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col10a1Q05306 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col10a1Q05306 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col10a1Q05306 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col10a1Q05306 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col10a1Q05306 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col10a1Q05306 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col10a1Q05306 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col10a1Q05306 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Col10a1Q05306 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col10a1Q05306 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
Col10a1Q05306 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col10a1Q05306 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col10a1Q05306 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col10a1Q05306 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col10a1Q05306 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Col10a1Q05306 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Col10a1Q05306 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col10a1Q05306 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Col10a1Q05306 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.76■□□□□ 0.43
Col10a1Q05306 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col10a1Q05306 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Col10a1Q05306 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col10a1Q05306 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col10a1Q05306 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col10a1Q05306 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col10a1Q05306 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Col10a1Q05306 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Col10a1Q05306 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col10a1Q05306 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col10a1Q05306 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col10a1Q05306 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col10a1Q05306 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.75■□□□□ 0.43
Col10a1Q05306 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col10a1Q05306 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col10a1Q05306 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col10a1Q05306 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Col10a1Q05306 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col10a1Q05306 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col10a1Q05306 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col10a1Q05306 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col10a1Q05306 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col10a1Q05306 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col10a1Q05306 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col10a1Q05306 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col10a1Q05306 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col10a1Q05306 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col10a1Q05306 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col10a1Q05306 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col10a1Q05306 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col10a1Q05306 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col10a1Q05306 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.73■□□□□ 0.43
Col10a1Q05306 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col10a1Q05306 Gm27801-201ENSMUST00000184174 223 ntBASIC17.73■□□□□ 0.43
Col10a1Q05306 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col10a1Q05306 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col10a1Q05306 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Col10a1Q05306 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Col10a1Q05306 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
Col10a1Q05306 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col10a1Q05306 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Col10a1Q05306 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col10a1Q05306 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col10a1Q05306 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.72■□□□□ 0.43
Col10a1Q05306 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Col10a1Q05306 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col10a1Q05306 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Col10a1Q05306 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col10a1Q05306 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col10a1Q05306 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Col10a1Q05306 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col10a1Q05306 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col10a1Q05306 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.71■□□□□ 0.43
Col10a1Q05306 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Col10a1Q05306 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Col10a1Q05306 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Col10a1Q05306 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col10a1Q05306 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col10a1Q05306 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col10a1Q05306 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col10a1Q05306 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col10a1Q05306 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col10a1Q05306 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col10a1Q05306 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col10a1Q05306 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col10a1Q05306 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col10a1Q05306 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.69■□□□□ 0.42
Col10a1Q05306 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col10a1Q05306 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col10a1Q05306 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Col10a1Q05306 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Col10a1Q05306 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Col10a1Q05306 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col10a1Q05306 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms