Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
NrlP54846 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NrlP54846 Gm13146-201ENSMUST00000118508 780 ntBASIC20.56■□□□□ 0.88
NrlP54846 Nespas-201ENSMUST00000143738 1083 ntBASIC20.56■□□□□ 0.88
NrlP54846 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.56■□□□□ 0.88
NrlP54846 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NrlP54846 Gm4968-201ENSMUST00000071458 858 ntBASIC20.56■□□□□ 0.88
NrlP54846 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NrlP54846 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NrlP54846 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.55■□□□□ 0.88
NrlP54846 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NrlP54846 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NrlP54846 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NrlP54846 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NrlP54846 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NrlP54846 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.54■□□□□ 0.88
NrlP54846 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.54■□□□□ 0.88
NrlP54846 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NrlP54846 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NrlP54846 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.54■□□□□ 0.88
NrlP54846 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
NrlP54846 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NrlP54846 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NrlP54846 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NrlP54846 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NrlP54846 Gm10653-202ENSMUST00000139570 835 ntBASIC20.53■□□□□ 0.88
NrlP54846 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NrlP54846 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.53■□□□□ 0.88
NrlP54846 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NrlP54846 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
NrlP54846 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NrlP54846 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
NrlP54846 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NrlP54846 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NrlP54846 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NrlP54846 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.53■□□□□ 0.88
NrlP54846 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
NrlP54846 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NrlP54846 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.52■□□□□ 0.88
NrlP54846 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
NrlP54846 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NrlP54846 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.52■□□□□ 0.88
NrlP54846 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NrlP54846 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.52■□□□□ 0.88
NrlP54846 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NrlP54846 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
NrlP54846 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NrlP54846 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NrlP54846 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
NrlP54846 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NrlP54846 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NrlP54846 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NrlP54846 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NrlP54846 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
NrlP54846 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NrlP54846 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NrlP54846 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
NrlP54846 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NrlP54846 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.51■□□□□ 0.87
NrlP54846 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NrlP54846 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NrlP54846 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NrlP54846 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NrlP54846 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NrlP54846 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NrlP54846 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NrlP54846 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NrlP54846 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NrlP54846 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
NrlP54846 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NrlP54846 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NrlP54846 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NrlP54846 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.5■□□□□ 0.87
NrlP54846 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NrlP54846 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NrlP54846 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NrlP54846 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
NrlP54846 Gm7290-201ENSMUST00000104990 617 ntBASIC20.49■□□□□ 0.87
NrlP54846 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.49■□□□□ 0.87
NrlP54846 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
NrlP54846 Gm12918-201ENSMUST00000120234 636 ntBASIC20.49■□□□□ 0.87
NrlP54846 Gm15710-201ENSMUST00000121821 636 ntBASIC20.49■□□□□ 0.87
NrlP54846 Gm5075-201ENSMUST00000196916 622 ntBASIC20.49■□□□□ 0.87
NrlP54846 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.49■□□□□ 0.87
NrlP54846 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.49■□□□□ 0.87
NrlP54846 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.49■□□□□ 0.87
NrlP54846 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.49■□□□□ 0.87
NrlP54846 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NrlP54846 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NrlP54846 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NrlP54846 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NrlP54846 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.49■□□□□ 0.87
NrlP54846 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
NrlP54846 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NrlP54846 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NrlP54846 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
NrlP54846 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
NrlP54846 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NrlP54846 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.48■□□□□ 0.87
NrlP54846 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms