Protein–RNA interactions for Protein: D3Z5T1

Ccdc78, Coiled-coil domain-containing protein 78, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc78D3Z5T1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.66■■□□□ 1.06
Ccdc78D3Z5T1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.66■■□□□ 1.06
Ccdc78D3Z5T1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.66■■□□□ 1.06
Ccdc78D3Z5T1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Ccdc78D3Z5T1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.66■■□□□ 1.06
Ccdc78D3Z5T1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc78D3Z5T1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Ccdc78D3Z5T1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc78D3Z5T1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc78D3Z5T1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc78D3Z5T1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc78D3Z5T1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc78D3Z5T1 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.64■■□□□ 1.06
Ccdc78D3Z5T1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.06
Ccdc78D3Z5T1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Ccdc78D3Z5T1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc78D3Z5T1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc78D3Z5T1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc78D3Z5T1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.64■■□□□ 1.05
Ccdc78D3Z5T1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.64■■□□□ 1.05
Ccdc78D3Z5T1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc78D3Z5T1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc78D3Z5T1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc78D3Z5T1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc78D3Z5T1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc78D3Z5T1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc78D3Z5T1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Ccdc78D3Z5T1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc78D3Z5T1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc78D3Z5T1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc78D3Z5T1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc78D3Z5T1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.63■■□□□ 1.05
Ccdc78D3Z5T1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc78D3Z5T1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc78D3Z5T1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc78D3Z5T1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Ccdc78D3Z5T1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.63■■□□□ 1.05
Ccdc78D3Z5T1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Ccdc78D3Z5T1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Ccdc78D3Z5T1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc78D3Z5T1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc78D3Z5T1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc78D3Z5T1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.62■■□□□ 1.05
Ccdc78D3Z5T1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc78D3Z5T1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc78D3Z5T1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc78D3Z5T1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.62■■□□□ 1.05
Ccdc78D3Z5T1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc78D3Z5T1 Gm29257-201ENSMUST00000186115 639 ntBASIC21.62■■□□□ 1.05
Ccdc78D3Z5T1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc78D3Z5T1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.62■■□□□ 1.05
Ccdc78D3Z5T1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc78D3Z5T1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc78D3Z5T1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc78D3Z5T1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Ccdc78D3Z5T1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc78D3Z5T1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.61■■□□□ 1.05
Ccdc78D3Z5T1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc78D3Z5T1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.61■■□□□ 1.05
Ccdc78D3Z5T1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.61■■□□□ 1.05
Ccdc78D3Z5T1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc78D3Z5T1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.61■■□□□ 1.05
Ccdc78D3Z5T1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Ccdc78D3Z5T1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.61■■□□□ 1.05
Ccdc78D3Z5T1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc78D3Z5T1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc78D3Z5T1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc78D3Z5T1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc78D3Z5T1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Ccdc78D3Z5T1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc78D3Z5T1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc78D3Z5T1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc78D3Z5T1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.6■■□□□ 1.05
Ccdc78D3Z5T1 Gm38205-201ENSMUST00000192243 258 ntBASIC21.6■■□□□ 1.05
Ccdc78D3Z5T1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.6■■□□□ 1.05
Ccdc78D3Z5T1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.6■■□□□ 1.05
Ccdc78D3Z5T1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Ccdc78D3Z5T1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.6■■□□□ 1.05
Ccdc78D3Z5T1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc78D3Z5T1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc78D3Z5T1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc78D3Z5T1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.59■■□□□ 1.05
Ccdc78D3Z5T1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc78D3Z5T1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.59■■□□□ 1.05
Ccdc78D3Z5T1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc78D3Z5T1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc78D3Z5T1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.59■■□□□ 1.05
Ccdc78D3Z5T1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Ccdc78D3Z5T1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc78D3Z5T1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.59■■□□□ 1.05
Ccdc78D3Z5T1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc78D3Z5T1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc78D3Z5T1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc78D3Z5T1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
Ccdc78D3Z5T1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc78D3Z5T1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc78D3Z5T1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Ccdc78D3Z5T1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Ccdc78D3Z5T1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc78D3Z5T1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms