Protein–RNA interactions for Protein: B1AZ99

Otud3, OTU domain-containing protein 3, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud3B1AZ99 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Otud3B1AZ99 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.52■□□□□ 0.56
Otud3B1AZ99 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Otud3B1AZ99 Gm45417-201ENSMUST00000209533 758 ntBASIC18.52■□□□□ 0.56
Otud3B1AZ99 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Otud3B1AZ99 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Otud3B1AZ99 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.52■□□□□ 0.55
Otud3B1AZ99 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Otud3B1AZ99 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Otud3B1AZ99 AA386476-201ENSMUST00000098781 1665 ntBASIC18.51■□□□□ 0.55
Otud3B1AZ99 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.51■□□□□ 0.55
Otud3B1AZ99 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.51■□□□□ 0.55
Otud3B1AZ99 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.51■□□□□ 0.55
Otud3B1AZ99 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.51■□□□□ 0.55
Otud3B1AZ99 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Otud3B1AZ99 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Otud3B1AZ99 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Otud3B1AZ99 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.5■□□□□ 0.55
Otud3B1AZ99 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Otud3B1AZ99 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Otud3B1AZ99 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Otud3B1AZ99 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Otud3B1AZ99 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Otud3B1AZ99 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Otud3B1AZ99 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.5■□□□□ 0.55
Otud3B1AZ99 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Otud3B1AZ99 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Otud3B1AZ99 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Otud3B1AZ99 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Otud3B1AZ99 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Otud3B1AZ99 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Otud3B1AZ99 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Otud3B1AZ99 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Otud3B1AZ99 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.49■□□□□ 0.55
Otud3B1AZ99 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Otud3B1AZ99 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.49■□□□□ 0.55
Otud3B1AZ99 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Otud3B1AZ99 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Otud3B1AZ99 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Otud3B1AZ99 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Otud3B1AZ99 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Otud3B1AZ99 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Otud3B1AZ99 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Otud3B1AZ99 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.49■□□□□ 0.55
Otud3B1AZ99 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Otud3B1AZ99 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Otud3B1AZ99 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Otud3B1AZ99 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Otud3B1AZ99 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Otud3B1AZ99 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.48■□□□□ 0.55
Otud3B1AZ99 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Otud3B1AZ99 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Otud3B1AZ99 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Otud3B1AZ99 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.48■□□□□ 0.55
Otud3B1AZ99 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.47■□□□□ 0.55
Otud3B1AZ99 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Otud3B1AZ99 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Otud3B1AZ99 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.47■□□□□ 0.55
Otud3B1AZ99 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.47■□□□□ 0.55
Otud3B1AZ99 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Otud3B1AZ99 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Otud3B1AZ99 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Otud3B1AZ99 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
Otud3B1AZ99 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Otud3B1AZ99 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Otud3B1AZ99 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Otud3B1AZ99 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Otud3B1AZ99 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Otud3B1AZ99 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.46■□□□□ 0.55
Otud3B1AZ99 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Otud3B1AZ99 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Otud3B1AZ99 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Otud3B1AZ99 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Otud3B1AZ99 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Otud3B1AZ99 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Otud3B1AZ99 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Otud3B1AZ99 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
Otud3B1AZ99 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Otud3B1AZ99 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Otud3B1AZ99 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Otud3B1AZ99 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Otud3B1AZ99 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Otud3B1AZ99 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Otud3B1AZ99 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Otud3B1AZ99 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Otud3B1AZ99 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Otud3B1AZ99 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Otud3B1AZ99 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Otud3B1AZ99 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Otud3B1AZ99 Mir7075-201ENSMUST00000184187 82 ntBASIC18.45■□□□□ 0.54
Otud3B1AZ99 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Otud3B1AZ99 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Otud3B1AZ99 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Otud3B1AZ99 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Otud3B1AZ99 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Otud3B1AZ99 Golph3-205ENSMUST00000228671 2842 ntBASIC18.44■□□□□ 0.54
Otud3B1AZ99 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Otud3B1AZ99 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Otud3B1AZ99 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Otud3B1AZ99 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms