Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav17A0A075B655 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav17A0A075B655 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav17A0A075B655 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Trav17A0A075B655 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav17A0A075B655 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav17A0A075B655 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav17A0A075B655 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav17A0A075B655 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav17A0A075B655 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav17A0A075B655 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav17A0A075B655 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav17A0A075B655 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav17A0A075B655 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav17A0A075B655 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav17A0A075B655 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav17A0A075B655 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav17A0A075B655 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav17A0A075B655 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav17A0A075B655 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav17A0A075B655 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC15.3■□□□□ 0.04
Trav17A0A075B655 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav17A0A075B655 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav17A0A075B655 Etf1-202ENSMUST00000180351 108 ntBASIC15.3■□□□□ 0.04
Trav17A0A075B655 Cap2-205ENSMUST00000225824 1634 ntBASIC15.3■□□□□ 0.04
Trav17A0A075B655 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav17A0A075B655 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav17A0A075B655 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav17A0A075B655 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav17A0A075B655 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav17A0A075B655 Gm9870-201ENSMUST00000063874 645 ntBASIC15.3■□□□□ 0.04
Trav17A0A075B655 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Trav17A0A075B655 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav17A0A075B655 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav17A0A075B655 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav17A0A075B655 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav17A0A075B655 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav17A0A075B655 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav17A0A075B655 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav17A0A075B655 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trav17A0A075B655 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav17A0A075B655 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav17A0A075B655 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav17A0A075B655 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trav17A0A075B655 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav17A0A075B655 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav17A0A075B655 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav17A0A075B655 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav17A0A075B655 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav17A0A075B655 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav17A0A075B655 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav17A0A075B655 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav17A0A075B655 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav17A0A075B655 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav17A0A075B655 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav17A0A075B655 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav17A0A075B655 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav17A0A075B655 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.28■□□□□ 0.04
Trav17A0A075B655 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav17A0A075B655 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav17A0A075B655 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav17A0A075B655 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav17A0A075B655 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav17A0A075B655 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav17A0A075B655 AA386476-201ENSMUST00000098781 1665 ntBASIC15.28■□□□□ 0.04
Trav17A0A075B655 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav17A0A075B655 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav17A0A075B655 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav17A0A075B655 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav17A0A075B655 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav17A0A075B655 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav17A0A075B655 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav17A0A075B655 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trav17A0A075B655 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav17A0A075B655 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav17A0A075B655 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav17A0A075B655 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav17A0A075B655 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trav17A0A075B655 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav17A0A075B655 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav17A0A075B655 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav17A0A075B655 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav17A0A075B655 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav17A0A075B655 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav17A0A075B655 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav17A0A075B655 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav17A0A075B655 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav17A0A075B655 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav17A0A075B655 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav17A0A075B655 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav17A0A075B655 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav17A0A075B655 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav17A0A075B655 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Trav17A0A075B655 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav17A0A075B655 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav17A0A075B655 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav17A0A075B655 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trav17A0A075B655 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Trav17A0A075B655 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav17A0A075B655 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms