Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-4A0A075B631 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav9n-4A0A075B631 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-4A0A075B631 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-4A0A075B631 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-4A0A075B631 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-4A0A075B631 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav9n-4A0A075B631 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-4A0A075B631 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-4A0A075B631 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-4A0A075B631 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav9n-4A0A075B631 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Trav9n-4A0A075B631 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-4A0A075B631 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-4A0A075B631 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav9n-4A0A075B631 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-4A0A075B631 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-4A0A075B631 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9n-4A0A075B631 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav9n-4A0A075B631 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9n-4A0A075B631 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9n-4A0A075B631 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9n-4A0A075B631 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9n-4A0A075B631 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9n-4A0A075B631 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav9n-4A0A075B631 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav9n-4A0A075B631 Gm43759-201ENSMUST00000196925 1261 ntBASIC13.17□□□□□ -0.3
Trav9n-4A0A075B631 Krt8-ps-201ENSMUST00000208495 945 ntBASIC13.17□□□□□ -0.3
Trav9n-4A0A075B631 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC13.17□□□□□ -0.3
Trav9n-4A0A075B631 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9n-4A0A075B631 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9n-4A0A075B631 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9n-4A0A075B631 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav9n-4A0A075B631 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav9n-4A0A075B631 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9n-4A0A075B631 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9n-4A0A075B631 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav9n-4A0A075B631 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9n-4A0A075B631 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9n-4A0A075B631 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav9n-4A0A075B631 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav9n-4A0A075B631 Gm8770-201ENSMUST00000121113 1109 ntBASIC13.16□□□□□ -0.3
Trav9n-4A0A075B631 Rps24-207ENSMUST00000224568 714 ntBASIC13.16□□□□□ -0.3
Trav9n-4A0A075B631 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9n-4A0A075B631 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9n-4A0A075B631 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9n-4A0A075B631 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav9n-4A0A075B631 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9n-4A0A075B631 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav9n-4A0A075B631 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9n-4A0A075B631 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9n-4A0A075B631 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9n-4A0A075B631 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC13.15□□□□□ -0.3
Trav9n-4A0A075B631 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9n-4A0A075B631 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav9n-4A0A075B631 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9n-4A0A075B631 Gm14117-201ENSMUST00000122417 843 ntBASIC13.15□□□□□ -0.3
Trav9n-4A0A075B631 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9n-4A0A075B631 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9n-4A0A075B631 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9n-4A0A075B631 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Trav9n-4A0A075B631 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9n-4A0A075B631 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9n-4A0A075B631 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9n-4A0A075B631 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9n-4A0A075B631 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav9n-4A0A075B631 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9n-4A0A075B631 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9n-4A0A075B631 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav9n-4A0A075B631 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9n-4A0A075B631 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9n-4A0A075B631 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9n-4A0A075B631 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9n-4A0A075B631 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9n-4A0A075B631 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9n-4A0A075B631 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Trav9n-4A0A075B631 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9n-4A0A075B631 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9n-4A0A075B631 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9n-4A0A075B631 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9n-4A0A075B631 Gm27045-201ENSMUST00000182145 1402 ntBASIC13.13□□□□□ -0.31
Trav9n-4A0A075B631 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9n-4A0A075B631 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9n-4A0A075B631 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9n-4A0A075B631 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9n-4A0A075B631 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9n-4A0A075B631 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9n-4A0A075B631 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9n-4A0A075B631 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9n-4A0A075B631 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav9n-4A0A075B631 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9n-4A0A075B631 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9n-4A0A075B631 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9n-4A0A075B631 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9n-4A0A075B631 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav9n-4A0A075B631 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav9n-4A0A075B631 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Trav9n-4A0A075B631 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9n-4A0A075B631 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9n-4A0A075B631 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms