Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rsph3bQ9DA80 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rsph3bQ9DA80 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.21■□□□□ 0.99
Rsph3bQ9DA80 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rsph3bQ9DA80 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.21■□□□□ 0.99
Rsph3bQ9DA80 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rsph3bQ9DA80 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rsph3bQ9DA80 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Rsph3bQ9DA80 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rsph3bQ9DA80 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rsph3bQ9DA80 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rsph3bQ9DA80 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rsph3bQ9DA80 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rsph3bQ9DA80 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rsph3bQ9DA80 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rsph3bQ9DA80 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Rsph3bQ9DA80 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.2■□□□□ 0.98
Rsph3bQ9DA80 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rsph3bQ9DA80 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.2■□□□□ 0.98
Rsph3bQ9DA80 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rsph3bQ9DA80 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rsph3bQ9DA80 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rsph3bQ9DA80 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Rsph3bQ9DA80 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rsph3bQ9DA80 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rsph3bQ9DA80 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Rsph3bQ9DA80 Gm7514-201ENSMUST00000209475 934 ntBASIC21.19■□□□□ 0.98
Rsph3bQ9DA80 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.19■□□□□ 0.98
Rsph3bQ9DA80 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rsph3bQ9DA80 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rsph3bQ9DA80 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Rsph3bQ9DA80 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rsph3bQ9DA80 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rsph3bQ9DA80 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Rsph3bQ9DA80 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rsph3bQ9DA80 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rsph3bQ9DA80 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rsph3bQ9DA80 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.18■□□□□ 0.98
Rsph3bQ9DA80 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rsph3bQ9DA80 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rsph3bQ9DA80 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.18■□□□□ 0.98
Rsph3bQ9DA80 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rsph3bQ9DA80 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rsph3bQ9DA80 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rsph3bQ9DA80 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rsph3bQ9DA80 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rsph3bQ9DA80 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rsph3bQ9DA80 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rsph3bQ9DA80 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.17■□□□□ 0.98
Rsph3bQ9DA80 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.17■□□□□ 0.98
Rsph3bQ9DA80 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.17■□□□□ 0.98
Rsph3bQ9DA80 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rsph3bQ9DA80 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rsph3bQ9DA80 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Rsph3bQ9DA80 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rsph3bQ9DA80 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rsph3bQ9DA80 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Rsph3bQ9DA80 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rsph3bQ9DA80 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rsph3bQ9DA80 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rsph3bQ9DA80 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.16■□□□□ 0.98
Rsph3bQ9DA80 Gm10602-201ENSMUST00000098239 609 ntBASIC21.16■□□□□ 0.98
Rsph3bQ9DA80 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rsph3bQ9DA80 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
Rsph3bQ9DA80 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Rsph3bQ9DA80 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rsph3bQ9DA80 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.15■□□□□ 0.98
Rsph3bQ9DA80 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rsph3bQ9DA80 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Rsph3bQ9DA80 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rsph3bQ9DA80 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rsph3bQ9DA80 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rsph3bQ9DA80 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rsph3bQ9DA80 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rsph3bQ9DA80 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.15■□□□□ 0.98
Rsph3bQ9DA80 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rsph3bQ9DA80 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.14■□□□□ 0.97
Rsph3bQ9DA80 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rsph3bQ9DA80 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Rsph3bQ9DA80 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Rsph3bQ9DA80 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rsph3bQ9DA80 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rsph3bQ9DA80 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rsph3bQ9DA80 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Rsph3bQ9DA80 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Rsph3bQ9DA80 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Rsph3bQ9DA80 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rsph3bQ9DA80 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Rsph3bQ9DA80 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rsph3bQ9DA80 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rsph3bQ9DA80 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rsph3bQ9DA80 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rsph3bQ9DA80 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rsph3bQ9DA80 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rsph3bQ9DA80 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rsph3bQ9DA80 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rsph3bQ9DA80 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rsph3bQ9DA80 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rsph3bQ9DA80 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rsph3bQ9DA80 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms