Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mbd3l1Q9D9H3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Mbd3l1Q9D9H3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mbd3l1Q9D9H3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.81■□□□□ 0.28
Mbd3l1Q9D9H3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mbd3l1Q9D9H3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mbd3l1Q9D9H3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mbd3l1Q9D9H3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mbd3l1Q9D9H3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mbd3l1Q9D9H3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Mbd3l1Q9D9H3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Mbd3l1Q9D9H3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mbd3l1Q9D9H3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.8■□□□□ 0.28
Mbd3l1Q9D9H3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mbd3l1Q9D9H3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mbd3l1Q9D9H3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mbd3l1Q9D9H3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mbd3l1Q9D9H3 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.8■□□□□ 0.28
Mbd3l1Q9D9H3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mbd3l1Q9D9H3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.8■□□□□ 0.28
Mbd3l1Q9D9H3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mbd3l1Q9D9H3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mbd3l1Q9D9H3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mbd3l1Q9D9H3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mbd3l1Q9D9H3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mbd3l1Q9D9H3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Mbd3l1Q9D9H3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Mbd3l1Q9D9H3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mbd3l1Q9D9H3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Mbd3l1Q9D9H3 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.79■□□□□ 0.28
Mbd3l1Q9D9H3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Mbd3l1Q9D9H3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mbd3l1Q9D9H3 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.79■□□□□ 0.28
Mbd3l1Q9D9H3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mbd3l1Q9D9H3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Mbd3l1Q9D9H3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Mbd3l1Q9D9H3 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.79■□□□□ 0.28
Mbd3l1Q9D9H3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Mbd3l1Q9D9H3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Mbd3l1Q9D9H3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mbd3l1Q9D9H3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mbd3l1Q9D9H3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Mbd3l1Q9D9H3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Mbd3l1Q9D9H3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mbd3l1Q9D9H3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.78■□□□□ 0.28
Mbd3l1Q9D9H3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mbd3l1Q9D9H3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Mbd3l1Q9D9H3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Mbd3l1Q9D9H3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mbd3l1Q9D9H3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mbd3l1Q9D9H3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mbd3l1Q9D9H3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Mbd3l1Q9D9H3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Mbd3l1Q9D9H3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Mbd3l1Q9D9H3 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.78■□□□□ 0.28
Mbd3l1Q9D9H3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mbd3l1Q9D9H3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mbd3l1Q9D9H3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mbd3l1Q9D9H3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mbd3l1Q9D9H3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Mbd3l1Q9D9H3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mbd3l1Q9D9H3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Mbd3l1Q9D9H3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Mbd3l1Q9D9H3 Nkain2-201ENSMUST00000092602 558 ntBASIC16.77■□□□□ 0.28
Mbd3l1Q9D9H3 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Mbd3l1Q9D9H3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Mbd3l1Q9D9H3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mbd3l1Q9D9H3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mbd3l1Q9D9H3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mbd3l1Q9D9H3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mbd3l1Q9D9H3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.76■□□□□ 0.27
Mbd3l1Q9D9H3 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.76■□□□□ 0.27
Mbd3l1Q9D9H3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Mbd3l1Q9D9H3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Mbd3l1Q9D9H3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Mbd3l1Q9D9H3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mbd3l1Q9D9H3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mbd3l1Q9D9H3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.76■□□□□ 0.27
Mbd3l1Q9D9H3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Mbd3l1Q9D9H3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mbd3l1Q9D9H3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mbd3l1Q9D9H3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Mbd3l1Q9D9H3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Mbd3l1Q9D9H3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.75■□□□□ 0.27
Mbd3l1Q9D9H3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Mbd3l1Q9D9H3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.75■□□□□ 0.27
Mbd3l1Q9D9H3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Mbd3l1Q9D9H3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mbd3l1Q9D9H3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mbd3l1Q9D9H3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mbd3l1Q9D9H3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mbd3l1Q9D9H3 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.75■□□□□ 0.27
Mbd3l1Q9D9H3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.75■□□□□ 0.27
Mbd3l1Q9D9H3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mbd3l1Q9D9H3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mbd3l1Q9D9H3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.75■□□□□ 0.27
Mbd3l1Q9D9H3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mbd3l1Q9D9H3 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.75■□□□□ 0.27
Mbd3l1Q9D9H3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Mbd3l1Q9D9H3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms