Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Golph3-205ENSMUST00000228671 2842 ntBASIC17.27■□□□□ 0.35
Raf1Q99N57 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Raf1Q99N57 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.27■□□□□ 0.35
Raf1Q99N57 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Raf1Q99N57 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Raf1Q99N57 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Raf1Q99N57 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Raf1Q99N57 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.26■□□□□ 0.35
Raf1Q99N57 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Raf1Q99N57 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Raf1Q99N57 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Raf1Q99N57 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
Raf1Q99N57 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Raf1Q99N57 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Raf1Q99N57 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Raf1Q99N57 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Raf1Q99N57 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Raf1Q99N57 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Raf1Q99N57 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Raf1Q99N57 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Raf1Q99N57 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.25■□□□□ 0.35
Raf1Q99N57 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Raf1Q99N57 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.25■□□□□ 0.35
Raf1Q99N57 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.25■□□□□ 0.35
Raf1Q99N57 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Raf1Q99N57 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Raf1Q99N57 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Raf1Q99N57 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Raf1Q99N57 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Raf1Q99N57 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Raf1Q99N57 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Raf1Q99N57 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Raf1Q99N57 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Raf1Q99N57 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Raf1Q99N57 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Raf1Q99N57 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Raf1Q99N57 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Raf1Q99N57 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Raf1Q99N57 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.24■□□□□ 0.35
Raf1Q99N57 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.24■□□□□ 0.35
Raf1Q99N57 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Raf1Q99N57 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
Raf1Q99N57 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.24■□□□□ 0.35
Raf1Q99N57 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Raf1Q99N57 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Raf1Q99N57 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Raf1Q99N57 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Raf1Q99N57 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Raf1Q99N57 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Raf1Q99N57 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Raf1Q99N57 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Raf1Q99N57 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Raf1Q99N57 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Raf1Q99N57 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Raf1Q99N57 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Raf1Q99N57 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Raf1Q99N57 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.23■□□□□ 0.35
Raf1Q99N57 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.23■□□□□ 0.35
Raf1Q99N57 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.23■□□□□ 0.35
Raf1Q99N57 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.23■□□□□ 0.35
Raf1Q99N57 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Raf1Q99N57 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Raf1Q99N57 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Raf1Q99N57 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Raf1Q99N57 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Raf1Q99N57 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Raf1Q99N57 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.22■□□□□ 0.35
Raf1Q99N57 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Raf1Q99N57 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Raf1Q99N57 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Raf1Q99N57 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Raf1Q99N57 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Raf1Q99N57 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Raf1Q99N57 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Raf1Q99N57 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Raf1Q99N57 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Raf1Q99N57 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Raf1Q99N57 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Raf1Q99N57 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Raf1Q99N57 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Raf1Q99N57 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
Raf1Q99N57 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Raf1Q99N57 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Raf1Q99N57 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Raf1Q99N57 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Raf1Q99N57 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Raf1Q99N57 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Raf1Q99N57 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Raf1Q99N57 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Raf1Q99N57 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Raf1Q99N57 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.2■□□□□ 0.34
Raf1Q99N57 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.2■□□□□ 0.34
Raf1Q99N57 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Raf1Q99N57 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Raf1Q99N57 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Raf1Q99N57 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Raf1Q99N57 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Raf1Q99N57 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Raf1Q99N57 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Raf1Q99N57 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms