Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scrt1Q99M85 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Scrt1Q99M85 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Scrt1Q99M85 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scrt1Q99M85 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scrt1Q99M85 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scrt1Q99M85 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scrt1Q99M85 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scrt1Q99M85 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scrt1Q99M85 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Scrt1Q99M85 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scrt1Q99M85 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scrt1Q99M85 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scrt1Q99M85 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scrt1Q99M85 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Scrt1Q99M85 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.94■□□□□ 0.3
Scrt1Q99M85 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scrt1Q99M85 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.94■□□□□ 0.3
Scrt1Q99M85 Gm22240-201ENSMUST00000175225 82 ntBASIC16.94■□□□□ 0.3
Scrt1Q99M85 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.94■□□□□ 0.3
Scrt1Q99M85 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.94■□□□□ 0.3
Scrt1Q99M85 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scrt1Q99M85 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scrt1Q99M85 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scrt1Q99M85 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Scrt1Q99M85 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scrt1Q99M85 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scrt1Q99M85 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scrt1Q99M85 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scrt1Q99M85 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scrt1Q99M85 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scrt1Q99M85 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Scrt1Q99M85 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Scrt1Q99M85 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scrt1Q99M85 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scrt1Q99M85 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.93■□□□□ 0.3
Scrt1Q99M85 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scrt1Q99M85 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.93■□□□□ 0.3
Scrt1Q99M85 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.93■□□□□ 0.3
Scrt1Q99M85 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.93■□□□□ 0.3
Scrt1Q99M85 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Scrt1Q99M85 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scrt1Q99M85 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scrt1Q99M85 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.93■□□□□ 0.3
Scrt1Q99M85 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.92■□□□□ 0.3
Scrt1Q99M85 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scrt1Q99M85 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scrt1Q99M85 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scrt1Q99M85 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scrt1Q99M85 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Scrt1Q99M85 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scrt1Q99M85 Mir5133-201ENSMUST00000174955 77 ntBASIC16.92■□□□□ 0.3
Scrt1Q99M85 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scrt1Q99M85 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scrt1Q99M85 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scrt1Q99M85 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.92■□□□□ 0.3
Scrt1Q99M85 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.92■□□□□ 0.3
Scrt1Q99M85 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.92■□□□□ 0.3
Scrt1Q99M85 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scrt1Q99M85 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scrt1Q99M85 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scrt1Q99M85 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Scrt1Q99M85 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scrt1Q99M85 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scrt1Q99M85 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scrt1Q99M85 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.91■□□□□ 0.3
Scrt1Q99M85 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scrt1Q99M85 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Scrt1Q99M85 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scrt1Q99M85 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scrt1Q99M85 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Scrt1Q99M85 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.91■□□□□ 0.3
Scrt1Q99M85 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scrt1Q99M85 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scrt1Q99M85 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scrt1Q99M85 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scrt1Q99M85 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scrt1Q99M85 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scrt1Q99M85 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scrt1Q99M85 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scrt1Q99M85 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scrt1Q99M85 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.9■□□□□ 0.3
Scrt1Q99M85 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scrt1Q99M85 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scrt1Q99M85 Gm4968-201ENSMUST00000071458 858 ntBASIC16.9■□□□□ 0.3
Scrt1Q99M85 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Scrt1Q99M85 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scrt1Q99M85 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scrt1Q99M85 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scrt1Q99M85 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Scrt1Q99M85 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scrt1Q99M85 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scrt1Q99M85 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Scrt1Q99M85 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Scrt1Q99M85 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Scrt1Q99M85 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scrt1Q99M85 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.89■□□□□ 0.29
Scrt1Q99M85 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scrt1Q99M85 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scrt1Q99M85 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms