Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cdk5rap3Q99LM2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cdk5rap3Q99LM2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdk5rap3Q99LM2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cdk5rap3Q99LM2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdk5rap3Q99LM2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cdk5rap3Q99LM2 Gm14117-201ENSMUST00000122417 843 ntBASIC20.02■□□□□ 0.8
Cdk5rap3Q99LM2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdk5rap3Q99LM2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Cdk5rap3Q99LM2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.79
Cdk5rap3Q99LM2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdk5rap3Q99LM2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdk5rap3Q99LM2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Cdk5rap3Q99LM2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdk5rap3Q99LM2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cdk5rap3Q99LM2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdk5rap3Q99LM2 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.01■□□□□ 0.79
Cdk5rap3Q99LM2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdk5rap3Q99LM2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Cdk5rap3Q99LM2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdk5rap3Q99LM2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdk5rap3Q99LM2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cdk5rap3Q99LM2 Rps24-207ENSMUST00000224568 714 ntBASIC20■□□□□ 0.79
Cdk5rap3Q99LM2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cdk5rap3Q99LM2 Gm5112-201ENSMUST00000204407 2368 ntBASIC20■□□□□ 0.79
Cdk5rap3Q99LM2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdk5rap3Q99LM2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdk5rap3Q99LM2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdk5rap3Q99LM2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdk5rap3Q99LM2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.99■□□□□ 0.79
Cdk5rap3Q99LM2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cdk5rap3Q99LM2 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.99■□□□□ 0.79
Cdk5rap3Q99LM2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Cdk5rap3Q99LM2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cdk5rap3Q99LM2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdk5rap3Q99LM2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cdk5rap3Q99LM2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdk5rap3Q99LM2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdk5rap3Q99LM2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Cdk5rap3Q99LM2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdk5rap3Q99LM2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
Cdk5rap3Q99LM2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdk5rap3Q99LM2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdk5rap3Q99LM2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdk5rap3Q99LM2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
Cdk5rap3Q99LM2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Cdk5rap3Q99LM2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdk5rap3Q99LM2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdk5rap3Q99LM2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cdk5rap3Q99LM2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.98■□□□□ 0.79
Cdk5rap3Q99LM2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.98■□□□□ 0.79
Cdk5rap3Q99LM2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.98■□□□□ 0.79
Cdk5rap3Q99LM2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.98■□□□□ 0.79
Cdk5rap3Q99LM2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
Cdk5rap3Q99LM2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdk5rap3Q99LM2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdk5rap3Q99LM2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Cdk5rap3Q99LM2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Cdk5rap3Q99LM2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdk5rap3Q99LM2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdk5rap3Q99LM2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdk5rap3Q99LM2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdk5rap3Q99LM2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdk5rap3Q99LM2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cdk5rap3Q99LM2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdk5rap3Q99LM2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cdk5rap3Q99LM2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cdk5rap3Q99LM2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdk5rap3Q99LM2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.97■□□□□ 0.79
Cdk5rap3Q99LM2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdk5rap3Q99LM2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdk5rap3Q99LM2 Golph3-205ENSMUST00000228671 2842 ntBASIC19.97■□□□□ 0.79
Cdk5rap3Q99LM2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.97■□□□□ 0.79
Cdk5rap3Q99LM2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdk5rap3Q99LM2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdk5rap3Q99LM2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Cdk5rap3Q99LM2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdk5rap3Q99LM2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
Cdk5rap3Q99LM2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Cdk5rap3Q99LM2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cdk5rap3Q99LM2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdk5rap3Q99LM2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Cdk5rap3Q99LM2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.96■□□□□ 0.79
Cdk5rap3Q99LM2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.96■□□□□ 0.79
Cdk5rap3Q99LM2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdk5rap3Q99LM2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdk5rap3Q99LM2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdk5rap3Q99LM2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.95■□□□□ 0.78
Cdk5rap3Q99LM2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdk5rap3Q99LM2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.95■□□□□ 0.78
Cdk5rap3Q99LM2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cdk5rap3Q99LM2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cdk5rap3Q99LM2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdk5rap3Q99LM2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Cdk5rap3Q99LM2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdk5rap3Q99LM2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdk5rap3Q99LM2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdk5rap3Q99LM2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdk5rap3Q99LM2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cdk5rap3Q99LM2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms