Protein–RNA interactions for Protein: Q91X43

Sh3d19, SH3 domain-containing protein 19, mousemouse

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d19Q91X43 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3d19Q91X43 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3d19Q91X43 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3d19Q91X43 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Sh3d19Q91X43 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3d19Q91X43 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.26■□□□□ 0.83
Sh3d19Q91X43 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.26■□□□□ 0.83
Sh3d19Q91X43 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.26■□□□□ 0.83
Sh3d19Q91X43 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3d19Q91X43 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.26■□□□□ 0.83
Sh3d19Q91X43 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Sh3d19Q91X43 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3d19Q91X43 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3d19Q91X43 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3d19Q91X43 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3d19Q91X43 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3d19Q91X43 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3d19Q91X43 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Sh3d19Q91X43 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3d19Q91X43 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3d19Q91X43 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.25■□□□□ 0.83
Sh3d19Q91X43 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3d19Q91X43 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3d19Q91X43 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3d19Q91X43 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3d19Q91X43 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3d19Q91X43 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3d19Q91X43 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3d19Q91X43 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3d19Q91X43 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3d19Q91X43 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
Sh3d19Q91X43 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Sh3d19Q91X43 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3d19Q91X43 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3d19Q91X43 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3d19Q91X43 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3d19Q91X43 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Sh3d19Q91X43 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3d19Q91X43 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3d19Q91X43 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3d19Q91X43 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3d19Q91X43 Gm13146-201ENSMUST00000118508 780 ntBASIC20.23■□□□□ 0.83
Sh3d19Q91X43 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Sh3d19Q91X43 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.23■□□□□ 0.83
Sh3d19Q91X43 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Sh3d19Q91X43 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3d19Q91X43 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3d19Q91X43 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3d19Q91X43 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3d19Q91X43 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3d19Q91X43 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Sh3d19Q91X43 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3d19Q91X43 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Sh3d19Q91X43 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.22■□□□□ 0.83
Sh3d19Q91X43 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3d19Q91X43 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3d19Q91X43 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3d19Q91X43 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Sh3d19Q91X43 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3d19Q91X43 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.22■□□□□ 0.83
Sh3d19Q91X43 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Sh3d19Q91X43 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3d19Q91X43 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Sh3d19Q91X43 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3d19Q91X43 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3d19Q91X43 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3d19Q91X43 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.21■□□□□ 0.83
Sh3d19Q91X43 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3d19Q91X43 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3d19Q91X43 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3d19Q91X43 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3d19Q91X43 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.21■□□□□ 0.83
Sh3d19Q91X43 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3d19Q91X43 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3d19Q91X43 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.2■□□□□ 0.82
Sh3d19Q91X43 Gm37179-201ENSMUST00000194862 823 ntBASIC20.2■□□□□ 0.82
Sh3d19Q91X43 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Sh3d19Q91X43 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.19■□□□□ 0.82
Sh3d19Q91X43 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Sh3d19Q91X43 Gm38205-201ENSMUST00000192243 258 ntBASIC20.19■□□□□ 0.82
Sh3d19Q91X43 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.19■□□□□ 0.82
Sh3d19Q91X43 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.19■□□□□ 0.82
Sh3d19Q91X43 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.19■□□□□ 0.82
Sh3d19Q91X43 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3d19Q91X43 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3d19Q91X43 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3d19Q91X43 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Sh3d19Q91X43 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3d19Q91X43 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3d19Q91X43 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3d19Q91X43 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Sh3d19Q91X43 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3d19Q91X43 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3d19Q91X43 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3d19Q91X43 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.18■□□□□ 0.82
Sh3d19Q91X43 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.18■□□□□ 0.82
Sh3d19Q91X43 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.18■□□□□ 0.82
Sh3d19Q91X43 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3d19Q91X43 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3d19Q91X43 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms