Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lrif1Q8CDD9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lrif1Q8CDD9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lrif1Q8CDD9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lrif1Q8CDD9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Lrif1Q8CDD9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Lrif1Q8CDD9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lrif1Q8CDD9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lrif1Q8CDD9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lrif1Q8CDD9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lrif1Q8CDD9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Lrif1Q8CDD9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lrif1Q8CDD9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lrif1Q8CDD9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lrif1Q8CDD9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lrif1Q8CDD9 Gm12922-201ENSMUST00000120626 809 ntBASIC19.1■□□□□ 0.65
Lrif1Q8CDD9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
Lrif1Q8CDD9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lrif1Q8CDD9 Gm9847-201ENSMUST00000052528 599 ntBASIC19.1■□□□□ 0.65
Lrif1Q8CDD9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lrif1Q8CDD9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Lrif1Q8CDD9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Lrif1Q8CDD9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lrif1Q8CDD9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.1■□□□□ 0.65
Lrif1Q8CDD9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lrif1Q8CDD9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lrif1Q8CDD9 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.09■□□□□ 0.65
Lrif1Q8CDD9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lrif1Q8CDD9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lrif1Q8CDD9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Lrif1Q8CDD9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.09■□□□□ 0.65
Lrif1Q8CDD9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lrif1Q8CDD9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lrif1Q8CDD9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lrif1Q8CDD9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Lrif1Q8CDD9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lrif1Q8CDD9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lrif1Q8CDD9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.08■□□□□ 0.64
Lrif1Q8CDD9 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.08■□□□□ 0.64
Lrif1Q8CDD9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lrif1Q8CDD9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Lrif1Q8CDD9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lrif1Q8CDD9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lrif1Q8CDD9 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.07■□□□□ 0.64
Lrif1Q8CDD9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Lrif1Q8CDD9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Lrif1Q8CDD9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lrif1Q8CDD9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.07■□□□□ 0.64
Lrif1Q8CDD9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lrif1Q8CDD9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Lrif1Q8CDD9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lrif1Q8CDD9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.07■□□□□ 0.64
Lrif1Q8CDD9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lrif1Q8CDD9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lrif1Q8CDD9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.06■□□□□ 0.64
Lrif1Q8CDD9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lrif1Q8CDD9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
Lrif1Q8CDD9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lrif1Q8CDD9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Lrif1Q8CDD9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lrif1Q8CDD9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lrif1Q8CDD9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lrif1Q8CDD9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.06■□□□□ 0.64
Lrif1Q8CDD9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Lrif1Q8CDD9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.05■□□□□ 0.64
Lrif1Q8CDD9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lrif1Q8CDD9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lrif1Q8CDD9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.05■□□□□ 0.64
Lrif1Q8CDD9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lrif1Q8CDD9 Grk6-206ENSMUST00000224995 2971 ntBASIC19.05■□□□□ 0.64
Lrif1Q8CDD9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lrif1Q8CDD9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.05■□□□□ 0.64
Lrif1Q8CDD9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lrif1Q8CDD9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lrif1Q8CDD9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lrif1Q8CDD9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lrif1Q8CDD9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lrif1Q8CDD9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lrif1Q8CDD9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lrif1Q8CDD9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lrif1Q8CDD9 BC021767-201ENSMUST00000126387 1716 ntBASIC19.04■□□□□ 0.64
Lrif1Q8CDD9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Lrif1Q8CDD9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Lrif1Q8CDD9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.04■□□□□ 0.64
Lrif1Q8CDD9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Lrif1Q8CDD9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lrif1Q8CDD9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Lrif1Q8CDD9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lrif1Q8CDD9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lrif1Q8CDD9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lrif1Q8CDD9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lrif1Q8CDD9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Lrif1Q8CDD9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Lrif1Q8CDD9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lrif1Q8CDD9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lrif1Q8CDD9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lrif1Q8CDD9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Lrif1Q8CDD9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lrif1Q8CDD9 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.03■□□□□ 0.64
Lrif1Q8CDD9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 144.5 ms