Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
R3hdm4Q4VBF2 Notumos-201ENSMUST00000151998 2659 ntBASIC20.97■□□□□ 0.95
R3hdm4Q4VBF2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
R3hdm4Q4VBF2 Gm27801-201ENSMUST00000184174 223 ntBASIC20.97■□□□□ 0.95
R3hdm4Q4VBF2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
R3hdm4Q4VBF2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.97■□□□□ 0.95
R3hdm4Q4VBF2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
R3hdm4Q4VBF2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
R3hdm4Q4VBF2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
R3hdm4Q4VBF2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
R3hdm4Q4VBF2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
R3hdm4Q4VBF2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.96■□□□□ 0.95
R3hdm4Q4VBF2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
R3hdm4Q4VBF2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
R3hdm4Q4VBF2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
R3hdm4Q4VBF2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
R3hdm4Q4VBF2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
R3hdm4Q4VBF2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
R3hdm4Q4VBF2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.95■□□□□ 0.94
R3hdm4Q4VBF2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.95■□□□□ 0.94
R3hdm4Q4VBF2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
R3hdm4Q4VBF2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
R3hdm4Q4VBF2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
R3hdm4Q4VBF2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
R3hdm4Q4VBF2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
R3hdm4Q4VBF2 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
R3hdm4Q4VBF2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
R3hdm4Q4VBF2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
R3hdm4Q4VBF2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
R3hdm4Q4VBF2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
R3hdm4Q4VBF2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.94■□□□□ 0.94
R3hdm4Q4VBF2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.94■□□□□ 0.94
R3hdm4Q4VBF2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
R3hdm4Q4VBF2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
R3hdm4Q4VBF2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
R3hdm4Q4VBF2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
R3hdm4Q4VBF2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
R3hdm4Q4VBF2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.93■□□□□ 0.94
R3hdm4Q4VBF2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
R3hdm4Q4VBF2 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.93■□□□□ 0.94
R3hdm4Q4VBF2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
R3hdm4Q4VBF2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
R3hdm4Q4VBF2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
R3hdm4Q4VBF2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
R3hdm4Q4VBF2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
R3hdm4Q4VBF2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
R3hdm4Q4VBF2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
R3hdm4Q4VBF2 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.92■□□□□ 0.94
R3hdm4Q4VBF2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.92■□□□□ 0.94
R3hdm4Q4VBF2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.92■□□□□ 0.94
R3hdm4Q4VBF2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
R3hdm4Q4VBF2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
R3hdm4Q4VBF2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.92■□□□□ 0.94
R3hdm4Q4VBF2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
R3hdm4Q4VBF2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
R3hdm4Q4VBF2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
R3hdm4Q4VBF2 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.92■□□□□ 0.94
R3hdm4Q4VBF2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
R3hdm4Q4VBF2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
R3hdm4Q4VBF2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
R3hdm4Q4VBF2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.91■□□□□ 0.94
R3hdm4Q4VBF2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
R3hdm4Q4VBF2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
R3hdm4Q4VBF2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
R3hdm4Q4VBF2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
R3hdm4Q4VBF2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
R3hdm4Q4VBF2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
R3hdm4Q4VBF2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
R3hdm4Q4VBF2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
R3hdm4Q4VBF2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
R3hdm4Q4VBF2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
R3hdm4Q4VBF2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
R3hdm4Q4VBF2 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.9■□□□□ 0.94
R3hdm4Q4VBF2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3hdm4Q4VBF2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
R3hdm4Q4VBF2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3hdm4Q4VBF2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.9■□□□□ 0.94
R3hdm4Q4VBF2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3hdm4Q4VBF2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3hdm4Q4VBF2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.9■□□□□ 0.94
R3hdm4Q4VBF2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
R3hdm4Q4VBF2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3hdm4Q4VBF2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
R3hdm4Q4VBF2 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.89■□□□□ 0.93
R3hdm4Q4VBF2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.89■□□□□ 0.93
R3hdm4Q4VBF2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
R3hdm4Q4VBF2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
R3hdm4Q4VBF2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
R3hdm4Q4VBF2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
R3hdm4Q4VBF2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.89■□□□□ 0.93
R3hdm4Q4VBF2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
R3hdm4Q4VBF2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
R3hdm4Q4VBF2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
R3hdm4Q4VBF2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
R3hdm4Q4VBF2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
R3hdm4Q4VBF2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
R3hdm4Q4VBF2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
R3hdm4Q4VBF2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
R3hdm4Q4VBF2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.88■□□□□ 0.93
R3hdm4Q4VBF2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms