Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Thumpd3P97770 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Thumpd3P97770 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.63■□□□□ 0.73
Thumpd3P97770 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Thumpd3P97770 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Thumpd3P97770 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Thumpd3P97770 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Thumpd3P97770 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Thumpd3P97770 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.62■□□□□ 0.73
Thumpd3P97770 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Thumpd3P97770 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Thumpd3P97770 Gm9870-201ENSMUST00000063874 645 ntBASIC19.62■□□□□ 0.73
Thumpd3P97770 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.62■□□□□ 0.73
Thumpd3P97770 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Thumpd3P97770 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Thumpd3P97770 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Thumpd3P97770 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Thumpd3P97770 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Thumpd3P97770 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Thumpd3P97770 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Thumpd3P97770 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Thumpd3P97770 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.61■□□□□ 0.73
Thumpd3P97770 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Thumpd3P97770 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Thumpd3P97770 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Thumpd3P97770 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Thumpd3P97770 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Thumpd3P97770 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.61■□□□□ 0.73
Thumpd3P97770 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Thumpd3P97770 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.61■□□□□ 0.73
Thumpd3P97770 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Thumpd3P97770 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Thumpd3P97770 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Thumpd3P97770 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Thumpd3P97770 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Thumpd3P97770 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.61■□□□□ 0.73
Thumpd3P97770 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Thumpd3P97770 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Thumpd3P97770 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Thumpd3P97770 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Thumpd3P97770 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Thumpd3P97770 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Thumpd3P97770 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Thumpd3P97770 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Thumpd3P97770 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Thumpd3P97770 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Thumpd3P97770 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Thumpd3P97770 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Thumpd3P97770 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Thumpd3P97770 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Thumpd3P97770 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Thumpd3P97770 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Thumpd3P97770 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.59■□□□□ 0.73
Thumpd3P97770 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Thumpd3P97770 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Thumpd3P97770 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Thumpd3P97770 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Thumpd3P97770 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Thumpd3P97770 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Thumpd3P97770 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Thumpd3P97770 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Thumpd3P97770 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Thumpd3P97770 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Thumpd3P97770 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Thumpd3P97770 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Thumpd3P97770 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Thumpd3P97770 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Thumpd3P97770 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.57■□□□□ 0.72
Thumpd3P97770 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Thumpd3P97770 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Thumpd3P97770 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Thumpd3P97770 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Thumpd3P97770 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Thumpd3P97770 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Thumpd3P97770 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Thumpd3P97770 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Thumpd3P97770 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Thumpd3P97770 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Thumpd3P97770 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Thumpd3P97770 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.56■□□□□ 0.72
Thumpd3P97770 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Thumpd3P97770 Mir6236-201ENSMUST00000184437 123 ntBASIC19.56■□□□□ 0.72
Thumpd3P97770 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Thumpd3P97770 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Thumpd3P97770 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Thumpd3P97770 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Thumpd3P97770 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Thumpd3P97770 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Thumpd3P97770 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Thumpd3P97770 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Thumpd3P97770 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Thumpd3P97770 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Thumpd3P97770 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.55■□□□□ 0.72
Thumpd3P97770 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.55■□□□□ 0.72
Thumpd3P97770 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Thumpd3P97770 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.55■□□□□ 0.72
Thumpd3P97770 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Thumpd3P97770 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Thumpd3P97770 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.55■□□□□ 0.72
Thumpd3P97770 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms