Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Fen1P39749 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.39■□□□□ 0.69
Fen1P39749 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Fen1P39749 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Fen1P39749 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Fen1P39749 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Fen1P39749 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.38■□□□□ 0.69
Fen1P39749 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Fen1P39749 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Fen1P39749 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Fen1P39749 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Fen1P39749 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Fen1P39749 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Fen1P39749 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Fen1P39749 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fen1P39749 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fen1P39749 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Fen1P39749 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
Fen1P39749 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fen1P39749 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fen1P39749 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fen1P39749 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Fen1P39749 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fen1P39749 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fen1P39749 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fen1P39749 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.37■□□□□ 0.69
Fen1P39749 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fen1P39749 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fen1P39749 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Fen1P39749 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Fen1P39749 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Fen1P39749 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Fen1P39749 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Fen1P39749 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Fen1P39749 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Fen1P39749 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Fen1P39749 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.36■□□□□ 0.69
Fen1P39749 Mir6236-201ENSMUST00000184437 123 ntBASIC19.36■□□□□ 0.69
Fen1P39749 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.36■□□□□ 0.69
Fen1P39749 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Fen1P39749 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Fen1P39749 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Fen1P39749 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Fen1P39749 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Fen1P39749 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Fen1P39749 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Fen1P39749 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Fen1P39749 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Fen1P39749 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Fen1P39749 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Fen1P39749 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Fen1P39749 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Fen1P39749 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.35■□□□□ 0.69
Fen1P39749 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.35■□□□□ 0.69
Fen1P39749 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Fen1P39749 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Fen1P39749 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Fen1P39749 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Fen1P39749 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Fen1P39749 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Fen1P39749 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.35■□□□□ 0.69
Fen1P39749 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Fen1P39749 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Fen1P39749 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Fen1P39749 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Fen1P39749 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fen1P39749 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fen1P39749 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fen1P39749 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fen1P39749 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Fen1P39749 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Fen1P39749 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Fen1P39749 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fen1P39749 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Fen1P39749 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fen1P39749 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fen1P39749 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fen1P39749 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fen1P39749 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fen1P39749 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Fen1P39749 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fen1P39749 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fen1P39749 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fen1P39749 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fen1P39749 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Fen1P39749 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Fen1P39749 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Fen1P39749 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Fen1P39749 Gm15039-201ENSMUST00000118914 875 ntBASIC19.33■□□□□ 0.68
Fen1P39749 Gm40881-201ENSMUST00000223397 166 ntBASIC19.33■□□□□ 0.68
Fen1P39749 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Fen1P39749 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Fen1P39749 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Fen1P39749 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Fen1P39749 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Fen1P39749 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Fen1P39749 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Fen1P39749 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Fen1P39749 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Fen1P39749 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms