Protein–RNA interactions for Protein: P28705

Rxrg, Retinoic acid receptor RXR-gamma, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrgP28705 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RxrgP28705 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RxrgP28705 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RxrgP28705 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
RxrgP28705 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RxrgP28705 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RxrgP28705 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RxrgP28705 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RxrgP28705 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RxrgP28705 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RxrgP28705 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RxrgP28705 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
RxrgP28705 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RxrgP28705 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RxrgP28705 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RxrgP28705 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RxrgP28705 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RxrgP28705 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RxrgP28705 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RxrgP28705 Gm42778-201ENSMUST00000199644 553 ntBASIC19.33■□□□□ 0.68
RxrgP28705 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.33■□□□□ 0.68
RxrgP28705 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RxrgP28705 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RxrgP28705 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RxrgP28705 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RxrgP28705 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RxrgP28705 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.32■□□□□ 0.68
RxrgP28705 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RxrgP28705 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RxrgP28705 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.31■□□□□ 0.68
RxrgP28705 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RxrgP28705 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RxrgP28705 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RxrgP28705 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
RxrgP28705 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.31■□□□□ 0.68
RxrgP28705 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RxrgP28705 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RxrgP28705 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RxrgP28705 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RxrgP28705 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.3■□□□□ 0.68
RxrgP28705 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RxrgP28705 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RxrgP28705 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.3■□□□□ 0.68
RxrgP28705 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RxrgP28705 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RxrgP28705 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RxrgP28705 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RxrgP28705 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RxrgP28705 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RxrgP28705 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RxrgP28705 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RxrgP28705 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RxrgP28705 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RxrgP28705 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RxrgP28705 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RxrgP28705 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RxrgP28705 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RxrgP28705 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.29■□□□□ 0.68
RxrgP28705 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RxrgP28705 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.29■□□□□ 0.68
RxrgP28705 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.29■□□□□ 0.68
RxrgP28705 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RxrgP28705 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RxrgP28705 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RxrgP28705 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RxrgP28705 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
RxrgP28705 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RxrgP28705 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RxrgP28705 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RxrgP28705 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RxrgP28705 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RxrgP28705 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RxrgP28705 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RxrgP28705 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RxrgP28705 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RxrgP28705 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RxrgP28705 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RxrgP28705 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.27■□□□□ 0.68
RxrgP28705 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
RxrgP28705 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RxrgP28705 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.27■□□□□ 0.68
RxrgP28705 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.27■□□□□ 0.68
RxrgP28705 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RxrgP28705 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RxrgP28705 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RxrgP28705 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RxrgP28705 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RxrgP28705 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RxrgP28705 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RxrgP28705 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RxrgP28705 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.26■□□□□ 0.67
RxrgP28705 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RxrgP28705 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.26■□□□□ 0.67
RxrgP28705 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
RxrgP28705 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RxrgP28705 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RxrgP28705 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RxrgP28705 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RxrgP28705 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RxrgP28705 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms