Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Gm43553-201ENSMUST00000200900 685 ntBASIC16.8■□□□□ 0.28
Dkk1O54908 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.8■□□□□ 0.28
Dkk1O54908 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.8■□□□□ 0.28
Dkk1O54908 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Dkk1O54908 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Dkk1O54908 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Dkk1O54908 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Dkk1O54908 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Dkk1O54908 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Dkk1O54908 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.79■□□□□ 0.28
Dkk1O54908 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Dkk1O54908 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Dkk1O54908 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Dkk1O54908 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Dkk1O54908 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Dkk1O54908 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Dkk1O54908 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Dkk1O54908 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Dkk1O54908 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Dkk1O54908 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Dkk1O54908 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Dkk1O54908 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Dkk1O54908 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Dkk1O54908 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Dkk1O54908 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Dkk1O54908 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Dkk1O54908 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Dkk1O54908 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Dkk1O54908 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.78■□□□□ 0.28
Dkk1O54908 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Dkk1O54908 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Dkk1O54908 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Dkk1O54908 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Dkk1O54908 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Dkk1O54908 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.77■□□□□ 0.28
Dkk1O54908 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Dkk1O54908 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
Dkk1O54908 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.77■□□□□ 0.28
Dkk1O54908 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.77■□□□□ 0.28
Dkk1O54908 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.77■□□□□ 0.28
Dkk1O54908 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Dkk1O54908 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Dkk1O54908 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Dkk1O54908 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Dkk1O54908 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
Dkk1O54908 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Dkk1O54908 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Dkk1O54908 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.76■□□□□ 0.27
Dkk1O54908 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.76■□□□□ 0.27
Dkk1O54908 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.76■□□□□ 0.27
Dkk1O54908 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dkk1O54908 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Dkk1O54908 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dkk1O54908 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dkk1O54908 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dkk1O54908 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Dkk1O54908 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Dkk1O54908 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dkk1O54908 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dkk1O54908 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.75■□□□□ 0.27
Dkk1O54908 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dkk1O54908 Gm45484-201ENSMUST00000210310 1141 ntBASIC16.75■□□□□ 0.27
Dkk1O54908 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dkk1O54908 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Dkk1O54908 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Dkk1O54908 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dkk1O54908 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dkk1O54908 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.75■□□□□ 0.27
Dkk1O54908 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.75■□□□□ 0.27
Dkk1O54908 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dkk1O54908 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dkk1O54908 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
Dkk1O54908 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dkk1O54908 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.74■□□□□ 0.27
Dkk1O54908 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dkk1O54908 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.74■□□□□ 0.27
Dkk1O54908 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Dkk1O54908 Gm26833-201ENSMUST00000180899 440 ntBASIC16.74■□□□□ 0.27
Dkk1O54908 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC16.74■□□□□ 0.27
Dkk1O54908 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dkk1O54908 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dkk1O54908 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.74■□□□□ 0.27
Dkk1O54908 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Dkk1O54908 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Dkk1O54908 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dkk1O54908 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Dkk1O54908 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Dkk1O54908 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Dkk1O54908 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dkk1O54908 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.73■□□□□ 0.27
Dkk1O54908 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Dkk1O54908 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Dkk1O54908 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Dkk1O54908 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Dkk1O54908 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Dkk1O54908 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Dkk1O54908 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Dkk1O54908 Gm11421-201ENSMUST00000122124 294 ntBASIC16.72■□□□□ 0.27
Dkk1O54908 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Dkk1O54908 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms