Protein–RNA interactions for Protein: O35980

Nthl1, Endonuclease III-like protein 1, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nthl1O35980 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nthl1O35980 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nthl1O35980 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Nthl1O35980 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.3■□□□□ 0.68
Nthl1O35980 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nthl1O35980 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nthl1O35980 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nthl1O35980 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nthl1O35980 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nthl1O35980 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nthl1O35980 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nthl1O35980 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nthl1O35980 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Nthl1O35980 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Nthl1O35980 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nthl1O35980 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nthl1O35980 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.28■□□□□ 0.68
Nthl1O35980 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Nthl1O35980 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nthl1O35980 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nthl1O35980 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.28■□□□□ 0.68
Nthl1O35980 Gm10602-201ENSMUST00000098239 609 ntBASIC19.28■□□□□ 0.68
Nthl1O35980 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nthl1O35980 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Nthl1O35980 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
Nthl1O35980 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nthl1O35980 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.27■□□□□ 0.68
Nthl1O35980 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nthl1O35980 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nthl1O35980 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Nthl1O35980 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Nthl1O35980 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Nthl1O35980 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Nthl1O35980 Gm13146-201ENSMUST00000118508 780 ntBASIC19.26■□□□□ 0.67
Nthl1O35980 Gm12933-201ENSMUST00000120203 872 ntBASIC19.26■□□□□ 0.67
Nthl1O35980 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Nthl1O35980 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.26■□□□□ 0.67
Nthl1O35980 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.26■□□□□ 0.67
Nthl1O35980 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.26■□□□□ 0.67
Nthl1O35980 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Nthl1O35980 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nthl1O35980 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.26■□□□□ 0.67
Nthl1O35980 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nthl1O35980 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nthl1O35980 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nthl1O35980 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nthl1O35980 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Nthl1O35980 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Nthl1O35980 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nthl1O35980 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nthl1O35980 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.25■□□□□ 0.67
Nthl1O35980 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Nthl1O35980 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.25■□□□□ 0.67
Nthl1O35980 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Nthl1O35980 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Nthl1O35980 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.25■□□□□ 0.67
Nthl1O35980 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.25■□□□□ 0.67
Nthl1O35980 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nthl1O35980 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nthl1O35980 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nthl1O35980 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.24■□□□□ 0.67
Nthl1O35980 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.24■□□□□ 0.67
Nthl1O35980 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Nthl1O35980 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nthl1O35980 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nthl1O35980 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Nthl1O35980 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nthl1O35980 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nthl1O35980 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Nthl1O35980 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nthl1O35980 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nthl1O35980 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nthl1O35980 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Nthl1O35980 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Nthl1O35980 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nthl1O35980 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Nthl1O35980 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Nthl1O35980 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nthl1O35980 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nthl1O35980 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nthl1O35980 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nthl1O35980 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nthl1O35980 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nthl1O35980 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nthl1O35980 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nthl1O35980 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nthl1O35980 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nthl1O35980 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nthl1O35980 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nthl1O35980 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nthl1O35980 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nthl1O35980 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nthl1O35980 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nthl1O35980 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nthl1O35980 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nthl1O35980 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.22■□□□□ 0.67
Nthl1O35980 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nthl1O35980 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nthl1O35980 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nthl1O35980 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms