Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7-5A0A0G2JFX6 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7-5A0A0G2JFX6 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.21■□□□□ 0.03
Trav7-5A0A0G2JFX6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7-5A0A0G2JFX6 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trav7-5A0A0G2JFX6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7-5A0A0G2JFX6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trav7-5A0A0G2JFX6 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav7-5A0A0G2JFX6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-5A0A0G2JFX6 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav7-5A0A0G2JFX6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav7-5A0A0G2JFX6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-5A0A0G2JFX6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav7-5A0A0G2JFX6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-5A0A0G2JFX6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-5A0A0G2JFX6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-5A0A0G2JFX6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-5A0A0G2JFX6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-5A0A0G2JFX6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-5A0A0G2JFX6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-5A0A0G2JFX6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-5A0A0G2JFX6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-5A0A0G2JFX6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-5A0A0G2JFX6 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Trav7-5A0A0G2JFX6 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav7-5A0A0G2JFX6 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-5A0A0G2JFX6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-5A0A0G2JFX6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav7-5A0A0G2JFX6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-5A0A0G2JFX6 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-5A0A0G2JFX6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-5A0A0G2JFX6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav7-5A0A0G2JFX6 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav7-5A0A0G2JFX6 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav7-5A0A0G2JFX6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav7-5A0A0G2JFX6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-5A0A0G2JFX6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-5A0A0G2JFX6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-5A0A0G2JFX6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-5A0A0G2JFX6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-5A0A0G2JFX6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-5A0A0G2JFX6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-5A0A0G2JFX6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-5A0A0G2JFX6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-5A0A0G2JFX6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.19■□□□□ 0.02
Trav7-5A0A0G2JFX6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-5A0A0G2JFX6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.19■□□□□ 0.02
Trav7-5A0A0G2JFX6 Smad6-203ENSMUST00000179458 273 ntBASIC15.19■□□□□ 0.02
Trav7-5A0A0G2JFX6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-5A0A0G2JFX6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-5A0A0G2JFX6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav7-5A0A0G2JFX6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav7-5A0A0G2JFX6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-5A0A0G2JFX6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-5A0A0G2JFX6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-5A0A0G2JFX6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-5A0A0G2JFX6 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav7-5A0A0G2JFX6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav7-5A0A0G2JFX6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-5A0A0G2JFX6 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav7-5A0A0G2JFX6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-5A0A0G2JFX6 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-5A0A0G2JFX6 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-5A0A0G2JFX6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.18■□□□□ 0.02
Trav7-5A0A0G2JFX6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-5A0A0G2JFX6 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-5A0A0G2JFX6 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-5A0A0G2JFX6 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-5A0A0G2JFX6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav7-5A0A0G2JFX6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-5A0A0G2JFX6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav7-5A0A0G2JFX6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-5A0A0G2JFX6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-5A0A0G2JFX6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav7-5A0A0G2JFX6 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-5A0A0G2JFX6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Trav7-5A0A0G2JFX6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-5A0A0G2JFX6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-5A0A0G2JFX6 Gm26833-201ENSMUST00000180899 440 ntBASIC15.17■□□□□ 0.02
Trav7-5A0A0G2JFX6 Gm21168-201ENSMUST00000199646 1096 ntBASIC15.17■□□□□ 0.02
Trav7-5A0A0G2JFX6 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-5A0A0G2JFX6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-5A0A0G2JFX6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-5A0A0G2JFX6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-5A0A0G2JFX6 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7-5A0A0G2JFX6 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7-5A0A0G2JFX6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7-5A0A0G2JFX6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7-5A0A0G2JFX6 Gm11421-201ENSMUST00000122124 294 ntBASIC15.16■□□□□ 0.02
Trav7-5A0A0G2JFX6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.16■□□□□ 0.02
Trav7-5A0A0G2JFX6 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7-5A0A0G2JFX6 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Trav7-5A0A0G2JFX6 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
Trav7-5A0A0G2JFX6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.16■□□□□ 0.02
Trav7-5A0A0G2JFX6 Gm43017-201ENSMUST00000198296 752 ntBASIC15.16■□□□□ 0.02
Trav7-5A0A0G2JFX6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.16■□□□□ 0.02
Trav7-5A0A0G2JFX6 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7-5A0A0G2JFX6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7-5A0A0G2JFX6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7-5A0A0G2JFX6 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 117.2 ms