Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn13Q9Z0S4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn13Q9Z0S4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn13Q9Z0S4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn13Q9Z0S4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cldn13Q9Z0S4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn13Q9Z0S4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn13Q9Z0S4 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.32■□□□□ 0.36
Cldn13Q9Z0S4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn13Q9Z0S4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.32■□□□□ 0.36
Cldn13Q9Z0S4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn13Q9Z0S4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn13Q9Z0S4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cldn13Q9Z0S4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn13Q9Z0S4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn13Q9Z0S4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn13Q9Z0S4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn13Q9Z0S4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn13Q9Z0S4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.31■□□□□ 0.36
Cldn13Q9Z0S4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn13Q9Z0S4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn13Q9Z0S4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cldn13Q9Z0S4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Cldn13Q9Z0S4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn13Q9Z0S4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Cldn13Q9Z0S4 Gm8493-201ENSMUST00000196881 489 ntBASIC17.31■□□□□ 0.36
Cldn13Q9Z0S4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cldn13Q9Z0S4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.31■□□□□ 0.36
Cldn13Q9Z0S4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.31■□□□□ 0.36
Cldn13Q9Z0S4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn13Q9Z0S4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn13Q9Z0S4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn13Q9Z0S4 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.31■□□□□ 0.36
Cldn13Q9Z0S4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn13Q9Z0S4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cldn13Q9Z0S4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn13Q9Z0S4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn13Q9Z0S4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.3■□□□□ 0.36
Cldn13Q9Z0S4 Spcs1-204ENSMUST00000226782 949 ntBASIC17.3■□□□□ 0.36
Cldn13Q9Z0S4 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.3■□□□□ 0.36
Cldn13Q9Z0S4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn13Q9Z0S4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn13Q9Z0S4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cldn13Q9Z0S4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cldn13Q9Z0S4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn13Q9Z0S4 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.3■□□□□ 0.36
Cldn13Q9Z0S4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Cldn13Q9Z0S4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Cldn13Q9Z0S4 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn13Q9Z0S4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn13Q9Z0S4 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.29■□□□□ 0.36
Cldn13Q9Z0S4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn13Q9Z0S4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn13Q9Z0S4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn13Q9Z0S4 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.29■□□□□ 0.36
Cldn13Q9Z0S4 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn13Q9Z0S4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn13Q9Z0S4 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.29■□□□□ 0.36
Cldn13Q9Z0S4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cldn13Q9Z0S4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn13Q9Z0S4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn13Q9Z0S4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn13Q9Z0S4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn13Q9Z0S4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.28■□□□□ 0.36
Cldn13Q9Z0S4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Cldn13Q9Z0S4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn13Q9Z0S4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn13Q9Z0S4 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn13Q9Z0S4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.28■□□□□ 0.36
Cldn13Q9Z0S4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn13Q9Z0S4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn13Q9Z0S4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn13Q9Z0S4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn13Q9Z0S4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn13Q9Z0S4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn13Q9Z0S4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.28■□□□□ 0.36
Cldn13Q9Z0S4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn13Q9Z0S4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn13Q9Z0S4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.27■□□□□ 0.36
Cldn13Q9Z0S4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn13Q9Z0S4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.27■□□□□ 0.36
Cldn13Q9Z0S4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn13Q9Z0S4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn13Q9Z0S4 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cldn13Q9Z0S4 Gm43017-201ENSMUST00000198296 752 ntBASIC17.27■□□□□ 0.36
Cldn13Q9Z0S4 Gm43173-201ENSMUST00000202246 593 ntBASIC17.27■□□□□ 0.36
Cldn13Q9Z0S4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn13Q9Z0S4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn13Q9Z0S4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn13Q9Z0S4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cldn13Q9Z0S4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cldn13Q9Z0S4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cldn13Q9Z0S4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cldn13Q9Z0S4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn13Q9Z0S4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn13Q9Z0S4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn13Q9Z0S4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn13Q9Z0S4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn13Q9Z0S4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn13Q9Z0S4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms