Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a4Q9QZR9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a4Q9QZR9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a4Q9QZR9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.94■□□□□ 0.78
Col4a4Q9QZR9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a4Q9QZR9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a4Q9QZR9 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.94■□□□□ 0.78
Col4a4Q9QZR9 Gm2559-201ENSMUST00000201323 363 ntBASIC19.94■□□□□ 0.78
Col4a4Q9QZR9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Col4a4Q9QZR9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Col4a4Q9QZR9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a4Q9QZR9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a4Q9QZR9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a4Q9QZR9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.93■□□□□ 0.78
Col4a4Q9QZR9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a4Q9QZR9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a4Q9QZR9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Col4a4Q9QZR9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a4Q9QZR9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.93■□□□□ 0.78
Col4a4Q9QZR9 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.93■□□□□ 0.78
Col4a4Q9QZR9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a4Q9QZR9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Col4a4Q9QZR9 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a4Q9QZR9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col4a4Q9QZR9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.92■□□□□ 0.78
Col4a4Q9QZR9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col4a4Q9QZR9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col4a4Q9QZR9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col4a4Q9QZR9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col4a4Q9QZR9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.91■□□□□ 0.78
Col4a4Q9QZR9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a4Q9QZR9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Col4a4Q9QZR9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a4Q9QZR9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a4Q9QZR9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a4Q9QZR9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Col4a4Q9QZR9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a4Q9QZR9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a4Q9QZR9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a4Q9QZR9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a4Q9QZR9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a4Q9QZR9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a4Q9QZR9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a4Q9QZR9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a4Q9QZR9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.9■□□□□ 0.78
Col4a4Q9QZR9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a4Q9QZR9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a4Q9QZR9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Col4a4Q9QZR9 Gm7860-201ENSMUST00000121190 879 ntBASIC19.9■□□□□ 0.78
Col4a4Q9QZR9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a4Q9QZR9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a4Q9QZR9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Col4a4Q9QZR9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a4Q9QZR9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a4Q9QZR9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Col4a4Q9QZR9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Col4a4Q9QZR9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col4a4Q9QZR9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col4a4Q9QZR9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.89■□□□□ 0.77
Col4a4Q9QZR9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col4a4Q9QZR9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Col4a4Q9QZR9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.89■□□□□ 0.77
Col4a4Q9QZR9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col4a4Q9QZR9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.88■□□□□ 0.77
Col4a4Q9QZR9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a4Q9QZR9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.88■□□□□ 0.77
Col4a4Q9QZR9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a4Q9QZR9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a4Q9QZR9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Col4a4Q9QZR9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a4Q9QZR9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a4Q9QZR9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a4Q9QZR9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.87■□□□□ 0.77
Col4a4Q9QZR9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a4Q9QZR9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Col4a4Q9QZR9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a4Q9QZR9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.87■□□□□ 0.77
Col4a4Q9QZR9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.87■□□□□ 0.77
Col4a4Q9QZR9 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.87■□□□□ 0.77
Col4a4Q9QZR9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a4Q9QZR9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a4Q9QZR9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a4Q9QZR9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a4Q9QZR9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a4Q9QZR9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a4Q9QZR9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a4Q9QZR9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a4Q9QZR9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Col4a4Q9QZR9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a4Q9QZR9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Col4a4Q9QZR9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a4Q9QZR9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a4Q9QZR9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a4Q9QZR9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a4Q9QZR9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a4Q9QZR9 Mir1199-201ENSMUST00000117015 119 ntBASIC19.85■□□□□ 0.77
Col4a4Q9QZR9 Mir5122-201ENSMUST00000175004 89 ntBASIC19.85■□□□□ 0.77
Col4a4Q9QZR9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a4Q9QZR9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a4Q9QZR9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms