Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb2Q91Y00 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Pcdhb2Q91Y00 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb2Q91Y00 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb2Q91Y00 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.67■□□□□ 0.9
Pcdhb2Q91Y00 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb2Q91Y00 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.67■□□□□ 0.9
Pcdhb2Q91Y00 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb2Q91Y00 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb2Q91Y00 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb2Q91Y00 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb2Q91Y00 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Pcdhb2Q91Y00 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.66■□□□□ 0.9
Pcdhb2Q91Y00 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.66■□□□□ 0.9
Pcdhb2Q91Y00 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.66■□□□□ 0.9
Pcdhb2Q91Y00 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb2Q91Y00 AA386476-201ENSMUST00000098781 1665 ntBASIC20.66■□□□□ 0.9
Pcdhb2Q91Y00 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Pcdhb2Q91Y00 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb2Q91Y00 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb2Q91Y00 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.65■□□□□ 0.9
Pcdhb2Q91Y00 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb2Q91Y00 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb2Q91Y00 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb2Q91Y00 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb2Q91Y00 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb2Q91Y00 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb2Q91Y00 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Pcdhb2Q91Y00 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb2Q91Y00 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Pcdhb2Q91Y00 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb2Q91Y00 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb2Q91Y00 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.64■□□□□ 0.9
Pcdhb2Q91Y00 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhb2Q91Y00 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb2Q91Y00 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb2Q91Y00 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Pcdhb2Q91Y00 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb2Q91Y00 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.64■□□□□ 0.89
Pcdhb2Q91Y00 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb2Q91Y00 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb2Q91Y00 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb2Q91Y00 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb2Q91Y00 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb2Q91Y00 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb2Q91Y00 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhb2Q91Y00 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.63■□□□□ 0.89
Pcdhb2Q91Y00 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb2Q91Y00 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb2Q91Y00 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb2Q91Y00 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb2Q91Y00 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb2Q91Y00 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb2Q91Y00 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb2Q91Y00 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhb2Q91Y00 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb2Q91Y00 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb2Q91Y00 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Pcdhb2Q91Y00 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb2Q91Y00 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb2Q91Y00 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb2Q91Y00 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Pcdhb2Q91Y00 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb2Q91Y00 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb2Q91Y00 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Pcdhb2Q91Y00 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb2Q91Y00 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Pcdhb2Q91Y00 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.61■□□□□ 0.89
Pcdhb2Q91Y00 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.61■□□□□ 0.89
Pcdhb2Q91Y00 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb2Q91Y00 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb2Q91Y00 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb2Q91Y00 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb2Q91Y00 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Pcdhb2Q91Y00 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb2Q91Y00 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb2Q91Y00 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb2Q91Y00 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.6■□□□□ 0.89
Pcdhb2Q91Y00 Gm18284-201ENSMUST00000172604 624 ntBASIC20.6■□□□□ 0.89
Pcdhb2Q91Y00 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb2Q91Y00 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.59■□□□□ 0.89
Pcdhb2Q91Y00 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb2Q91Y00 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb2Q91Y00 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.59■□□□□ 0.89
Pcdhb2Q91Y00 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.59■□□□□ 0.89
Pcdhb2Q91Y00 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb2Q91Y00 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb2Q91Y00 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb2Q91Y00 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb2Q91Y00 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb2Q91Y00 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb2Q91Y00 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb2Q91Y00 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.58■□□□□ 0.89
Pcdhb2Q91Y00 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Pcdhb2Q91Y00 Gm27801-201ENSMUST00000184174 223 ntBASIC20.58■□□□□ 0.89
Pcdhb2Q91Y00 Gm5874-201ENSMUST00000096101 508 ntBASIC20.58■□□□□ 0.89
Pcdhb2Q91Y00 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Pcdhb2Q91Y00 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhb2Q91Y00 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhb2Q91Y00 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 149.7 ms