Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx41Q91VN6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx41Q91VN6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx41Q91VN6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx41Q91VN6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx41Q91VN6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx41Q91VN6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx41Q91VN6 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC22.24■■□□□ 1.15
Ddx41Q91VN6 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx41Q91VN6 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx41Q91VN6 Gm26571-201ENSMUST00000181399 666 ntBASIC22.24■■□□□ 1.15
Ddx41Q91VN6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx41Q91VN6 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx41Q91VN6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx41Q91VN6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx41Q91VN6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.24■■□□□ 1.15
Ddx41Q91VN6 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC22.23■■□□□ 1.15
Ddx41Q91VN6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx41Q91VN6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx41Q91VN6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx41Q91VN6 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Ddx41Q91VN6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Ddx41Q91VN6 AC099934.2-201ENSMUST00000196389 70 ntBASIC22.23■■□□□ 1.15
Ddx41Q91VN6 AC156953.1-201ENSMUST00000196953 70 ntBASIC22.23■■□□□ 1.15
Ddx41Q91VN6 AC157822.2-201ENSMUST00000200291 70 ntBASIC22.23■■□□□ 1.15
Ddx41Q91VN6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx41Q91VN6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx41Q91VN6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx41Q91VN6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx41Q91VN6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx41Q91VN6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx41Q91VN6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx41Q91VN6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx41Q91VN6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Ddx41Q91VN6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx41Q91VN6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx41Q91VN6 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx41Q91VN6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC22.22■■□□□ 1.15
Ddx41Q91VN6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx41Q91VN6 Gm42642-201ENSMUST00000200683 355 ntBASIC22.22■■□□□ 1.15
Ddx41Q91VN6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx41Q91VN6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx41Q91VN6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC22.21■■□□□ 1.15
Ddx41Q91VN6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx41Q91VN6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx41Q91VN6 Gm11421-201ENSMUST00000122124 294 ntBASIC22.21■■□□□ 1.15
Ddx41Q91VN6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx41Q91VN6 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Ddx41Q91VN6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC22.21■■□□□ 1.15
Ddx41Q91VN6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx41Q91VN6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC22.21■■□□□ 1.15
Ddx41Q91VN6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
Ddx41Q91VN6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx41Q91VN6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx41Q91VN6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx41Q91VN6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx41Q91VN6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.15
Ddx41Q91VN6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Ddx41Q91VN6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ddx41Q91VN6 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ddx41Q91VN6 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ddx41Q91VN6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ddx41Q91VN6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC22.2■■□□□ 1.14
Ddx41Q91VN6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ddx41Q91VN6 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx41Q91VN6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx41Q91VN6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx41Q91VN6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC22.19■■□□□ 1.14
Ddx41Q91VN6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx41Q91VN6 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx41Q91VN6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx41Q91VN6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx41Q91VN6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx41Q91VN6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx41Q91VN6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC22.18■■□□□ 1.14
Ddx41Q91VN6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx41Q91VN6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx41Q91VN6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC22.18■■□□□ 1.14
Ddx41Q91VN6 Gm10849-201ENSMUST00000100397 618 ntBASIC22.18■■□□□ 1.14
Ddx41Q91VN6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx41Q91VN6 Gm7291-201ENSMUST00000199147 382 ntBASIC22.18■■□□□ 1.14
Ddx41Q91VN6 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC22.18■■□□□ 1.14
Ddx41Q91VN6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx41Q91VN6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx41Q91VN6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx41Q91VN6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx41Q91VN6 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx41Q91VN6 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx41Q91VN6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx41Q91VN6 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC22.17■■□□□ 1.14
Ddx41Q91VN6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx41Q91VN6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx41Q91VN6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx41Q91VN6 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Ddx41Q91VN6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx41Q91VN6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx41Q91VN6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx41Q91VN6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx41Q91VN6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx41Q91VN6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 109 ms