Protein–RNA interactions for Protein: Q8VE18

Smg8, Protein SMG8, mousemouse

Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg8Q8VE18 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smg8Q8VE18 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smg8Q8VE18 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smg8Q8VE18 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.84■□□□□ 0.93
Smg8Q8VE18 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smg8Q8VE18 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smg8Q8VE18 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smg8Q8VE18 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smg8Q8VE18 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smg8Q8VE18 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smg8Q8VE18 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Smg8Q8VE18 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Smg8Q8VE18 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Smg8Q8VE18 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.83■□□□□ 0.92
Smg8Q8VE18 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smg8Q8VE18 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smg8Q8VE18 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.82■□□□□ 0.92
Smg8Q8VE18 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smg8Q8VE18 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.82■□□□□ 0.92
Smg8Q8VE18 Gm7514-201ENSMUST00000209475 934 ntBASIC20.82■□□□□ 0.92
Smg8Q8VE18 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smg8Q8VE18 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Smg8Q8VE18 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smg8Q8VE18 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.82■□□□□ 0.92
Smg8Q8VE18 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smg8Q8VE18 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smg8Q8VE18 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smg8Q8VE18 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smg8Q8VE18 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smg8Q8VE18 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smg8Q8VE18 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Smg8Q8VE18 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.81■□□□□ 0.92
Smg8Q8VE18 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smg8Q8VE18 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Smg8Q8VE18 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.81■□□□□ 0.92
Smg8Q8VE18 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smg8Q8VE18 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smg8Q8VE18 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smg8Q8VE18 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Smg8Q8VE18 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smg8Q8VE18 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smg8Q8VE18 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smg8Q8VE18 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smg8Q8VE18 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smg8Q8VE18 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smg8Q8VE18 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smg8Q8VE18 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smg8Q8VE18 Gm38205-201ENSMUST00000192243 258 ntBASIC20.8■□□□□ 0.92
Smg8Q8VE18 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smg8Q8VE18 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smg8Q8VE18 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smg8Q8VE18 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smg8Q8VE18 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smg8Q8VE18 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smg8Q8VE18 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smg8Q8VE18 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Smg8Q8VE18 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smg8Q8VE18 Gm13146-201ENSMUST00000118508 780 ntBASIC20.79■□□□□ 0.92
Smg8Q8VE18 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smg8Q8VE18 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.79■□□□□ 0.92
Smg8Q8VE18 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Smg8Q8VE18 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smg8Q8VE18 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smg8Q8VE18 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smg8Q8VE18 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.78■□□□□ 0.92
Smg8Q8VE18 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smg8Q8VE18 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smg8Q8VE18 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smg8Q8VE18 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smg8Q8VE18 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.78■□□□□ 0.92
Smg8Q8VE18 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Smg8Q8VE18 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smg8Q8VE18 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smg8Q8VE18 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smg8Q8VE18 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smg8Q8VE18 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smg8Q8VE18 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smg8Q8VE18 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.77■□□□□ 0.92
Smg8Q8VE18 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smg8Q8VE18 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Smg8Q8VE18 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Smg8Q8VE18 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smg8Q8VE18 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smg8Q8VE18 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Smg8Q8VE18 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Smg8Q8VE18 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Smg8Q8VE18 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smg8Q8VE18 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Smg8Q8VE18 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Smg8Q8VE18 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Smg8Q8VE18 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.76■□□□□ 0.91
Smg8Q8VE18 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smg8Q8VE18 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smg8Q8VE18 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Smg8Q8VE18 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smg8Q8VE18 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smg8Q8VE18 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.75■□□□□ 0.91
Smg8Q8VE18 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.75■□□□□ 0.91
Smg8Q8VE18 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smg8Q8VE18 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms