Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q8VDP2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Q8VDP2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.88■□□□□ 0.61
Q8VDP2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q8VDP2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q8VDP2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q8VDP2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q8VDP2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q8VDP2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q8VDP2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q8VDP2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Q8VDP2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Q8VDP2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Q8VDP2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Q8VDP2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Q8VDP2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Q8VDP2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Q8VDP2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Q8VDP2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Q8VDP2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Q8VDP2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
Q8VDP2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Q8VDP2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Q8VDP2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Q8VDP2 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.86■□□□□ 0.61
Q8VDP2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Q8VDP2 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.86■□□□□ 0.61
Q8VDP2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Q8VDP2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Q8VDP2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Q8VDP2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q8VDP2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q8VDP2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q8VDP2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q8VDP2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q8VDP2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q8VDP2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.85■□□□□ 0.61
Q8VDP2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q8VDP2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q8VDP2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.85■□□□□ 0.61
Q8VDP2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Q8VDP2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q8VDP2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q8VDP2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Q8VDP2 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.85■□□□□ 0.61
Q8VDP2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.85■□□□□ 0.61
Q8VDP2 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Q8VDP2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q8VDP2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q8VDP2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Q8VDP2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.84■□□□□ 0.61
Q8VDP2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q8VDP2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q8VDP2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q8VDP2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.84■□□□□ 0.61
Q8VDP2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Q8VDP2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Q8VDP2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.83■□□□□ 0.61
Q8VDP2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Q8VDP2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Q8VDP2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Q8VDP2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Q8VDP2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.83■□□□□ 0.6
Q8VDP2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.83■□□□□ 0.6
Q8VDP2 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.83■□□□□ 0.6
Q8VDP2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Q8VDP2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Q8VDP2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Q8VDP2 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Q8VDP2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Q8VDP2 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.82■□□□□ 0.6
Q8VDP2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Q8VDP2 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.82■□□□□ 0.6
Q8VDP2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Q8VDP2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q8VDP2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Q8VDP2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Q8VDP2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q8VDP2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q8VDP2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q8VDP2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q8VDP2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q8VDP2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.81■□□□□ 0.6
Q8VDP2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q8VDP2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Q8VDP2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q8VDP2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q8VDP2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Q8VDP2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q8VDP2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Q8VDP2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q8VDP2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.81■□□□□ 0.6
Q8VDP2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q8VDP2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q8VDP2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Q8VDP2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Q8VDP2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q8VDP2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q8VDP2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q8VDP2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms