Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Usp6nlQ80XC3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp6nlQ80XC3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp6nlQ80XC3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp6nlQ80XC3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp6nlQ80XC3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp6nlQ80XC3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.56■■□□□ 1.04
Usp6nlQ80XC3 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.56■■□□□ 1.04
Usp6nlQ80XC3 Gm6365-201ENSMUST00000054711 744 ntBASIC21.56■■□□□ 1.04
Usp6nlQ80XC3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp6nlQ80XC3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
Usp6nlQ80XC3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp6nlQ80XC3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Usp6nlQ80XC3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp6nlQ80XC3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Usp6nlQ80XC3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Usp6nlQ80XC3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Usp6nlQ80XC3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Usp6nlQ80XC3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Usp6nlQ80XC3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Usp6nlQ80XC3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Usp6nlQ80XC3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.55■■□□□ 1.04
Usp6nlQ80XC3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
Usp6nlQ80XC3 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.55■■□□□ 1.04
Usp6nlQ80XC3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Usp6nlQ80XC3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Usp6nlQ80XC3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Usp6nlQ80XC3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Usp6nlQ80XC3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Usp6nlQ80XC3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Usp6nlQ80XC3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Usp6nlQ80XC3 Gm20760-201ENSMUST00000179197 648 ntBASIC21.54■■□□□ 1.04
Usp6nlQ80XC3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Usp6nlQ80XC3 Gm6420-201ENSMUST00000193885 723 ntBASIC21.54■■□□□ 1.04
Usp6nlQ80XC3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Usp6nlQ80XC3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
Usp6nlQ80XC3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Usp6nlQ80XC3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Usp6nlQ80XC3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Usp6nlQ80XC3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Usp6nlQ80XC3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.54■■□□□ 1.04
Usp6nlQ80XC3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Usp6nlQ80XC3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Usp6nlQ80XC3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.53■■□□□ 1.04
Usp6nlQ80XC3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.53■■□□□ 1.04
Usp6nlQ80XC3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Usp6nlQ80XC3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Usp6nlQ80XC3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
Usp6nlQ80XC3 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.53■■□□□ 1.04
Usp6nlQ80XC3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Usp6nlQ80XC3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Usp6nlQ80XC3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Usp6nlQ80XC3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Usp6nlQ80XC3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
Usp6nlQ80XC3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Usp6nlQ80XC3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.52■■□□□ 1.04
Usp6nlQ80XC3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.52■■□□□ 1.04
Usp6nlQ80XC3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.52■■□□□ 1.04
Usp6nlQ80XC3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Usp6nlQ80XC3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Usp6nlQ80XC3 AA386476-201ENSMUST00000098781 1665 ntBASIC21.51■■□□□ 1.03
Usp6nlQ80XC3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Usp6nlQ80XC3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.51■■□□□ 1.03
Usp6nlQ80XC3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Usp6nlQ80XC3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Usp6nlQ80XC3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Usp6nlQ80XC3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Usp6nlQ80XC3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Usp6nlQ80XC3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Usp6nlQ80XC3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.51■■□□□ 1.03
Usp6nlQ80XC3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Usp6nlQ80XC3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Usp6nlQ80XC3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Usp6nlQ80XC3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.5■■□□□ 1.03
Usp6nlQ80XC3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Usp6nlQ80XC3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Usp6nlQ80XC3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Usp6nlQ80XC3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Usp6nlQ80XC3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Usp6nlQ80XC3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Usp6nlQ80XC3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Usp6nlQ80XC3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Usp6nlQ80XC3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Usp6nlQ80XC3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Usp6nlQ80XC3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Usp6nlQ80XC3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Usp6nlQ80XC3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Usp6nlQ80XC3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Usp6nlQ80XC3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.48■■□□□ 1.03
Usp6nlQ80XC3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.48■■□□□ 1.03
Usp6nlQ80XC3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Usp6nlQ80XC3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Usp6nlQ80XC3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Usp6nlQ80XC3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Usp6nlQ80XC3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Usp6nlQ80XC3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Usp6nlQ80XC3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Usp6nlQ80XC3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.47■■□□□ 1.03
Usp6nlQ80XC3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Usp6nlQ80XC3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms