Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC30.61■■■□□ 2.49
Rpap1Q80TE0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC30.61■■■□□ 2.49
Rpap1Q80TE0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Rpap1Q80TE0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Rpap1Q80TE0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Rpap1Q80TE0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC30.6■■■□□ 2.49
Rpap1Q80TE0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
Rpap1Q80TE0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
Rpap1Q80TE0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC30.6■■■□□ 2.49
Rpap1Q80TE0 Gm15043-201ENSMUST00000118843 1543 ntBASIC30.6■■■□□ 2.49
Rpap1Q80TE0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC30.59■■■□□ 2.49
Rpap1Q80TE0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC30.59■■■□□ 2.49
Rpap1Q80TE0 AC158538.1-201ENSMUST00000225870 294 ntBASIC30.59■■■□□ 2.49
Rpap1Q80TE0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC30.59■■■□□ 2.49
Rpap1Q80TE0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
Rpap1Q80TE0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Rpap1Q80TE0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Rpap1Q80TE0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC30.58■■■□□ 2.49
Rpap1Q80TE0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Rpap1Q80TE0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC30.58■■■□□ 2.49
Rpap1Q80TE0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC30.58■■■□□ 2.49
Rpap1Q80TE0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
Rpap1Q80TE0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Rpap1Q80TE0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
Rpap1Q80TE0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
Rpap1Q80TE0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC30.58■■■□□ 2.49
Rpap1Q80TE0 Gm13181-201ENSMUST00000120117 1069 ntBASIC30.57■■■□□ 2.48
Rpap1Q80TE0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
Rpap1Q80TE0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Rpap1Q80TE0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Rpap1Q80TE0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
Rpap1Q80TE0 Gm43909-201ENSMUST00000203443 1876 ntBASIC30.57■■■□□ 2.48
Rpap1Q80TE0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Rpap1Q80TE0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Rpap1Q80TE0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Rpap1Q80TE0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Rpap1Q80TE0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC30.56■■■□□ 2.48
Rpap1Q80TE0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
Rpap1Q80TE0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Rpap1Q80TE0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Rpap1Q80TE0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC30.56■■■□□ 2.48
Rpap1Q80TE0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC30.56■■■□□ 2.48
Rpap1Q80TE0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
Rpap1Q80TE0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
Rpap1Q80TE0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Rpap1Q80TE0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Rpap1Q80TE0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Rpap1Q80TE0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Rpap1Q80TE0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Rpap1Q80TE0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
Rpap1Q80TE0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Rpap1Q80TE0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Rpap1Q80TE0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Rpap1Q80TE0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
Rpap1Q80TE0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
Rpap1Q80TE0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Rpap1Q80TE0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Rpap1Q80TE0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
Rpap1Q80TE0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Rpap1Q80TE0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Rpap1Q80TE0 Gm44672-201ENSMUST00000206944 1098 ntBASIC30.53■■■□□ 2.48
Rpap1Q80TE0 Gm32051-202ENSMUST00000197905 2385 ntBASIC30.53■■■□□ 2.48
Rpap1Q80TE0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC30.52■■■□□ 2.48
Rpap1Q80TE0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC30.52■■■□□ 2.48
Rpap1Q80TE0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
Rpap1Q80TE0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
Rpap1Q80TE0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
Rpap1Q80TE0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Rpap1Q80TE0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
Rpap1Q80TE0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC30.52■■■□□ 2.48
Rpap1Q80TE0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Rpap1Q80TE0 Mir6982-201ENSMUST00000184354 68 ntBASIC30.51■■■□□ 2.47
Rpap1Q80TE0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Rpap1Q80TE0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Rpap1Q80TE0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Rpap1Q80TE0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Rpap1Q80TE0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Rpap1Q80TE0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
Rpap1Q80TE0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Rpap1Q80TE0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Rpap1Q80TE0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Rpap1Q80TE0 Gm29241-201ENSMUST00000189260 1096 ntBASIC30.49■■■□□ 2.47
Rpap1Q80TE0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Rpap1Q80TE0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Rpap1Q80TE0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Rpap1Q80TE0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Rpap1Q80TE0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
Rpap1Q80TE0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Rpap1Q80TE0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Rpap1Q80TE0 Gm27275-201ENSMUST00000184318 272 ntBASIC30.47■■■□□ 2.47
Rpap1Q80TE0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
Rpap1Q80TE0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Rpap1Q80TE0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Rpap1Q80TE0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Rpap1Q80TE0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC30.47■■■□□ 2.47
Rpap1Q80TE0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC30.46■■■□□ 2.47
Rpap1Q80TE0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC30.46■■■□□ 2.47
Rpap1Q80TE0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Rpap1Q80TE0 Dmtn-209ENSMUST00000228295 2572 ntBASIC30.46■■■□□ 2.47
Rpap1Q80TE0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC30.46■■■□□ 2.47
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms