Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
VcanQ62059 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VcanQ62059 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VcanQ62059 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VcanQ62059 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.59■□□□□ 0.57
VcanQ62059 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VcanQ62059 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.58■□□□□ 0.57
VcanQ62059 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VcanQ62059 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
VcanQ62059 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
VcanQ62059 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.58■□□□□ 0.56
VcanQ62059 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.58■□□□□ 0.56
VcanQ62059 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VcanQ62059 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VcanQ62059 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
VcanQ62059 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VcanQ62059 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VcanQ62059 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
VcanQ62059 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VcanQ62059 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.57■□□□□ 0.56
VcanQ62059 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
VcanQ62059 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VcanQ62059 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VcanQ62059 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
VcanQ62059 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.57■□□□□ 0.56
VcanQ62059 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VcanQ62059 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
VcanQ62059 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.56■□□□□ 0.56
VcanQ62059 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VcanQ62059 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VcanQ62059 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.56■□□□□ 0.56
VcanQ62059 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VcanQ62059 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VcanQ62059 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VcanQ62059 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
VcanQ62059 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VcanQ62059 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VcanQ62059 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
VcanQ62059 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VcanQ62059 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VcanQ62059 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VcanQ62059 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
VcanQ62059 Gm7367-201ENSMUST00000057611 492 ntBASIC18.55■□□□□ 0.56
VcanQ62059 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VcanQ62059 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VcanQ62059 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VcanQ62059 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VcanQ62059 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
VcanQ62059 Gm13146-201ENSMUST00000118508 780 ntBASIC18.54■□□□□ 0.56
VcanQ62059 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VcanQ62059 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VcanQ62059 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.54■□□□□ 0.56
VcanQ62059 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VcanQ62059 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VcanQ62059 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VcanQ62059 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VcanQ62059 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VcanQ62059 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VcanQ62059 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
VcanQ62059 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VcanQ62059 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VcanQ62059 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
VcanQ62059 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VcanQ62059 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VcanQ62059 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VcanQ62059 Gm18101-201ENSMUST00000215769 548 ntBASIC18.53■□□□□ 0.56
VcanQ62059 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VcanQ62059 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VcanQ62059 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
VcanQ62059 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.52■□□□□ 0.56
VcanQ62059 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VcanQ62059 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VcanQ62059 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
VcanQ62059 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VcanQ62059 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
VcanQ62059 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
VcanQ62059 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.52■□□□□ 0.55
VcanQ62059 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.52■□□□□ 0.55
VcanQ62059 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
VcanQ62059 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
VcanQ62059 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.51■□□□□ 0.55
VcanQ62059 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VcanQ62059 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
VcanQ62059 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.5■□□□□ 0.55
VcanQ62059 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
VcanQ62059 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
VcanQ62059 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
VcanQ62059 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VcanQ62059 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.5■□□□□ 0.55
VcanQ62059 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VcanQ62059 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VcanQ62059 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.5■□□□□ 0.55
VcanQ62059 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.5■□□□□ 0.55
VcanQ62059 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.5■□□□□ 0.55
VcanQ62059 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VcanQ62059 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
VcanQ62059 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
VcanQ62059 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
VcanQ62059 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.49■□□□□ 0.55
VcanQ62059 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms