Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Clns1aQ61189 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clns1aQ61189 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clns1aQ61189 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Clns1aQ61189 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.61■□□□□ 0.25
Clns1aQ61189 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clns1aQ61189 Gm10420-201ENSMUST00000121713 882 ntBASIC16.6■□□□□ 0.25
Clns1aQ61189 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clns1aQ61189 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Clns1aQ61189 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clns1aQ61189 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.6■□□□□ 0.25
Clns1aQ61189 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clns1aQ61189 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clns1aQ61189 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Clns1aQ61189 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Clns1aQ61189 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Clns1aQ61189 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clns1aQ61189 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Clns1aQ61189 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Clns1aQ61189 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clns1aQ61189 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clns1aQ61189 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clns1aQ61189 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Clns1aQ61189 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clns1aQ61189 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clns1aQ61189 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clns1aQ61189 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clns1aQ61189 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Clns1aQ61189 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clns1aQ61189 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.59■□□□□ 0.25
Clns1aQ61189 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Clns1aQ61189 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clns1aQ61189 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Clns1aQ61189 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Clns1aQ61189 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clns1aQ61189 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clns1aQ61189 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clns1aQ61189 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clns1aQ61189 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Clns1aQ61189 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Clns1aQ61189 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.58■□□□□ 0.24
Clns1aQ61189 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clns1aQ61189 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Clns1aQ61189 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clns1aQ61189 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clns1aQ61189 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Clns1aQ61189 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clns1aQ61189 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clns1aQ61189 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clns1aQ61189 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clns1aQ61189 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clns1aQ61189 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.57■□□□□ 0.24
Clns1aQ61189 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clns1aQ61189 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clns1aQ61189 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clns1aQ61189 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clns1aQ61189 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clns1aQ61189 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clns1aQ61189 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clns1aQ61189 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clns1aQ61189 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.57■□□□□ 0.24
Clns1aQ61189 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.57■□□□□ 0.24
Clns1aQ61189 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Clns1aQ61189 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clns1aQ61189 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Clns1aQ61189 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clns1aQ61189 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Clns1aQ61189 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clns1aQ61189 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Clns1aQ61189 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clns1aQ61189 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clns1aQ61189 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clns1aQ61189 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Clns1aQ61189 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Clns1aQ61189 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clns1aQ61189 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clns1aQ61189 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clns1aQ61189 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clns1aQ61189 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clns1aQ61189 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clns1aQ61189 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clns1aQ61189 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clns1aQ61189 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Clns1aQ61189 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clns1aQ61189 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Clns1aQ61189 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Clns1aQ61189 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clns1aQ61189 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clns1aQ61189 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clns1aQ61189 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clns1aQ61189 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clns1aQ61189 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clns1aQ61189 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.54■□□□□ 0.24
Clns1aQ61189 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Clns1aQ61189 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clns1aQ61189 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clns1aQ61189 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Clns1aQ61189 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Clns1aQ61189 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Clns1aQ61189 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms