Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43aQ3TL54 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43aQ3TL54 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Trim43aQ3TL54 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43aQ3TL54 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43aQ3TL54 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43aQ3TL54 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim43aQ3TL54 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim43aQ3TL54 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Trim43aQ3TL54 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim43aQ3TL54 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim43aQ3TL54 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim43aQ3TL54 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Trim43aQ3TL54 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim43aQ3TL54 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim43aQ3TL54 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Trim43aQ3TL54 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim43aQ3TL54 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Trim43aQ3TL54 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim43aQ3TL54 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.58■□□□□ 0.89
Trim43aQ3TL54 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.58■□□□□ 0.89
Trim43aQ3TL54 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.58■□□□□ 0.89
Trim43aQ3TL54 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Trim43aQ3TL54 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Trim43aQ3TL54 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim43aQ3TL54 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim43aQ3TL54 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim43aQ3TL54 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim43aQ3TL54 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim43aQ3TL54 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim43aQ3TL54 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim43aQ3TL54 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim43aQ3TL54 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim43aQ3TL54 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim43aQ3TL54 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim43aQ3TL54 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim43aQ3TL54 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Trim43aQ3TL54 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim43aQ3TL54 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.56■□□□□ 0.88
Trim43aQ3TL54 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.56■□□□□ 0.88
Trim43aQ3TL54 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim43aQ3TL54 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim43aQ3TL54 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim43aQ3TL54 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim43aQ3TL54 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Trim43aQ3TL54 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim43aQ3TL54 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim43aQ3TL54 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim43aQ3TL54 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim43aQ3TL54 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.55■□□□□ 0.88
Trim43aQ3TL54 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim43aQ3TL54 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.55■□□□□ 0.88
Trim43aQ3TL54 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Trim43aQ3TL54 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
Trim43aQ3TL54 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim43aQ3TL54 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim43aQ3TL54 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim43aQ3TL54 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim43aQ3TL54 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim43aQ3TL54 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim43aQ3TL54 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim43aQ3TL54 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.54■□□□□ 0.88
Trim43aQ3TL54 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim43aQ3TL54 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim43aQ3TL54 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.54■□□□□ 0.88
Trim43aQ3TL54 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.54■□□□□ 0.88
Trim43aQ3TL54 Gm9870-201ENSMUST00000063874 645 ntBASIC20.54■□□□□ 0.88
Trim43aQ3TL54 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Trim43aQ3TL54 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Trim43aQ3TL54 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Trim43aQ3TL54 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim43aQ3TL54 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim43aQ3TL54 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim43aQ3TL54 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.53■□□□□ 0.88
Trim43aQ3TL54 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim43aQ3TL54 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim43aQ3TL54 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim43aQ3TL54 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim43aQ3TL54 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim43aQ3TL54 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim43aQ3TL54 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim43aQ3TL54 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim43aQ3TL54 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim43aQ3TL54 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim43aQ3TL54 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.52■□□□□ 0.88
Trim43aQ3TL54 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.52■□□□□ 0.88
Trim43aQ3TL54 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim43aQ3TL54 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim43aQ3TL54 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trim43aQ3TL54 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trim43aQ3TL54 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Trim43aQ3TL54 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Trim43aQ3TL54 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.51■□□□□ 0.87
Trim43aQ3TL54 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.51■□□□□ 0.87
Trim43aQ3TL54 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.51■□□□□ 0.87
Trim43aQ3TL54 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim43aQ3TL54 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.51■□□□□ 0.87
Trim43aQ3TL54 AA386476-201ENSMUST00000098781 1665 ntBASIC20.51■□□□□ 0.87
Trim43aQ3TL54 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim43aQ3TL54 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms