Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Thumpd3P97770 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Thumpd3P97770 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Thumpd3P97770 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Thumpd3P97770 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Thumpd3P97770 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.7■□□□□ 0.74
Thumpd3P97770 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Thumpd3P97770 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Thumpd3P97770 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.7■□□□□ 0.74
Thumpd3P97770 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Thumpd3P97770 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Thumpd3P97770 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Thumpd3P97770 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Thumpd3P97770 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Thumpd3P97770 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Thumpd3P97770 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Thumpd3P97770 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Thumpd3P97770 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.69■□□□□ 0.74
Thumpd3P97770 Gm7143-201ENSMUST00000222811 859 ntBASIC19.69■□□□□ 0.74
Thumpd3P97770 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.69■□□□□ 0.74
Thumpd3P97770 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Thumpd3P97770 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Thumpd3P97770 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Thumpd3P97770 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.69■□□□□ 0.74
Thumpd3P97770 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Thumpd3P97770 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Thumpd3P97770 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Thumpd3P97770 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Thumpd3P97770 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Thumpd3P97770 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Thumpd3P97770 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Thumpd3P97770 Gm27454-201ENSMUST00000185090 204 ntBASIC19.68■□□□□ 0.74
Thumpd3P97770 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Thumpd3P97770 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Thumpd3P97770 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Thumpd3P97770 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Thumpd3P97770 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Thumpd3P97770 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.68■□□□□ 0.74
Thumpd3P97770 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Thumpd3P97770 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Thumpd3P97770 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Thumpd3P97770 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Thumpd3P97770 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Thumpd3P97770 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Thumpd3P97770 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.67■□□□□ 0.74
Thumpd3P97770 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Thumpd3P97770 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Thumpd3P97770 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Thumpd3P97770 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Thumpd3P97770 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Thumpd3P97770 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.67■□□□□ 0.74
Thumpd3P97770 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Thumpd3P97770 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Thumpd3P97770 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Thumpd3P97770 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Thumpd3P97770 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Thumpd3P97770 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Thumpd3P97770 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Thumpd3P97770 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Thumpd3P97770 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Thumpd3P97770 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Thumpd3P97770 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Thumpd3P97770 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Thumpd3P97770 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Thumpd3P97770 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Thumpd3P97770 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Thumpd3P97770 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Thumpd3P97770 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Thumpd3P97770 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Thumpd3P97770 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Thumpd3P97770 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.65■□□□□ 0.74
Thumpd3P97770 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
Thumpd3P97770 Gm45417-201ENSMUST00000209533 758 ntBASIC19.65■□□□□ 0.74
Thumpd3P97770 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Thumpd3P97770 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Thumpd3P97770 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Thumpd3P97770 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Thumpd3P97770 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Thumpd3P97770 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.65■□□□□ 0.74
Thumpd3P97770 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Thumpd3P97770 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Thumpd3P97770 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Thumpd3P97770 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Thumpd3P97770 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Thumpd3P97770 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Thumpd3P97770 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Thumpd3P97770 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.64■□□□□ 0.73
Thumpd3P97770 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Thumpd3P97770 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Thumpd3P97770 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Thumpd3P97770 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Thumpd3P97770 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Thumpd3P97770 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Thumpd3P97770 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Thumpd3P97770 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Thumpd3P97770 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Thumpd3P97770 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Thumpd3P97770 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Thumpd3P97770 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Thumpd3P97770 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms