Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf1aP25118 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf1aP25118 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf1aP25118 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf1aP25118 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf1aP25118 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf1aP25118 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf1aP25118 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf1aP25118 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf1aP25118 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
Tnfrsf1aP25118 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf1aP25118 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.28■□□□□ 0.2
Tnfrsf1aP25118 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.28■□□□□ 0.2
Tnfrsf1aP25118 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.28■□□□□ 0.2
Tnfrsf1aP25118 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf1aP25118 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf1aP25118 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Tnfrsf1aP25118 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf1aP25118 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf1aP25118 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf1aP25118 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.28■□□□□ 0.2
Tnfrsf1aP25118 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Tnfrsf1aP25118 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.28■□□□□ 0.2
Tnfrsf1aP25118 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf1aP25118 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf1aP25118 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf1aP25118 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Tnfrsf1aP25118 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Tnfrsf1aP25118 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf1aP25118 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf1aP25118 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.27■□□□□ 0.2
Tnfrsf1aP25118 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf1aP25118 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf1aP25118 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf1aP25118 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tnfrsf1aP25118 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tnfrsf1aP25118 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.27■□□□□ 0.19
Tnfrsf1aP25118 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf1aP25118 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf1aP25118 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.26■□□□□ 0.19
Tnfrsf1aP25118 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf1aP25118 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf1aP25118 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf1aP25118 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf1aP25118 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.26■□□□□ 0.19
Tnfrsf1aP25118 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf1aP25118 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf1aP25118 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf1aP25118 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf1aP25118 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf1aP25118 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf1aP25118 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf1aP25118 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf1aP25118 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfrsf1aP25118 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf1aP25118 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf1aP25118 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf1aP25118 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf1aP25118 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf1aP25118 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf1aP25118 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.25■□□□□ 0.19
Tnfrsf1aP25118 Golgb1-201ENSMUST00000023534 498 ntBASIC16.25■□□□□ 0.19
Tnfrsf1aP25118 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf1aP25118 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf1aP25118 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf1aP25118 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tnfrsf1aP25118 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tnfrsf1aP25118 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Tnfrsf1aP25118 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tnfrsf1aP25118 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tnfrsf1aP25118 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Tnfrsf1aP25118 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Tnfrsf1aP25118 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Tnfrsf1aP25118 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.24■□□□□ 0.19
Tnfrsf1aP25118 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.24■□□□□ 0.19
Tnfrsf1aP25118 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tnfrsf1aP25118 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.24■□□□□ 0.19
Tnfrsf1aP25118 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Tnfrsf1aP25118 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.23■□□□□ 0.19
Tnfrsf1aP25118 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Tnfrsf1aP25118 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf1aP25118 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf1aP25118 Gm12922-201ENSMUST00000120626 809 ntBASIC16.23■□□□□ 0.19
Tnfrsf1aP25118 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.23■□□□□ 0.19
Tnfrsf1aP25118 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Tnfrsf1aP25118 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf1aP25118 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf1aP25118 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf1aP25118 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf1aP25118 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf1aP25118 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf1aP25118 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Tnfrsf1aP25118 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Tnfrsf1aP25118 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf1aP25118 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Tnfrsf1aP25118 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Tnfrsf1aP25118 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf1aP25118 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf1aP25118 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Tnfrsf1aP25118 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms