Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Msh3P13705 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Msh3P13705 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Msh3P13705 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Msh3P13705 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.5■■□□□ 1.03
Msh3P13705 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Msh3P13705 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Msh3P13705 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Msh3P13705 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Msh3P13705 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Msh3P13705 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.49■■□□□ 1.03
Msh3P13705 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Msh3P13705 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Msh3P13705 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.48■■□□□ 1.03
Msh3P13705 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.48■■□□□ 1.03
Msh3P13705 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Msh3P13705 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Msh3P13705 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Msh3P13705 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Msh3P13705 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Msh3P13705 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Msh3P13705 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Msh3P13705 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Msh3P13705 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Msh3P13705 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Msh3P13705 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Msh3P13705 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Msh3P13705 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Msh3P13705 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Msh3P13705 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Msh3P13705 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Msh3P13705 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Msh3P13705 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Msh3P13705 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.46■■□□□ 1.03
Msh3P13705 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Msh3P13705 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Msh3P13705 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Msh3P13705 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Msh3P13705 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Msh3P13705 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Msh3P13705 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.45■■□□□ 1.02
Msh3P13705 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Msh3P13705 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Msh3P13705 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
Msh3P13705 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.45■■□□□ 1.02
Msh3P13705 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
Msh3P13705 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Msh3P13705 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Msh3P13705 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Msh3P13705 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
Msh3P13705 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Msh3P13705 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Msh3P13705 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.44■■□□□ 1.02
Msh3P13705 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Msh3P13705 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Msh3P13705 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Msh3P13705 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Msh3P13705 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Msh3P13705 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Msh3P13705 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.44■■□□□ 1.02
Msh3P13705 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Msh3P13705 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Msh3P13705 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Msh3P13705 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
Msh3P13705 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Msh3P13705 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Msh3P13705 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Msh3P13705 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Msh3P13705 Gm11421-201ENSMUST00000122124 294 ntBASIC21.43■■□□□ 1.02
Msh3P13705 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Msh3P13705 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Msh3P13705 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Msh3P13705 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.43■■□□□ 1.02
Msh3P13705 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Msh3P13705 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Msh3P13705 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Msh3P13705 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Msh3P13705 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.42■■□□□ 1.02
Msh3P13705 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Msh3P13705 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Msh3P13705 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Msh3P13705 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Msh3P13705 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Msh3P13705 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Msh3P13705 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Msh3P13705 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Msh3P13705 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Msh3P13705 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.41■■□□□ 1.02
Msh3P13705 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Msh3P13705 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Msh3P13705 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Msh3P13705 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.4■■□□□ 1.02
Msh3P13705 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Msh3P13705 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.4■■□□□ 1.02
Msh3P13705 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Msh3P13705 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Msh3P13705 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Msh3P13705 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Msh3P13705 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Msh3P13705 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.39■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms