Protein–RNA interactions for Protein: A2ACT7

Col9a3, Collagen, type IX, alpha 3, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3A2ACT7 Gm13534-201ENSMUST00000121169 513 ntBASIC19.13■□□□□ 0.65
Col9a3A2ACT7 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.13■□□□□ 0.65
Col9a3A2ACT7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col9a3A2ACT7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.13■□□□□ 0.65
Col9a3A2ACT7 AA386476-201ENSMUST00000098781 1665 ntBASIC19.12■□□□□ 0.65
Col9a3A2ACT7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.12■□□□□ 0.65
Col9a3A2ACT7 Gm7290-201ENSMUST00000104990 617 ntBASIC19.12■□□□□ 0.65
Col9a3A2ACT7 Gm12918-201ENSMUST00000120234 636 ntBASIC19.12■□□□□ 0.65
Col9a3A2ACT7 Gm15710-201ENSMUST00000121821 636 ntBASIC19.12■□□□□ 0.65
Col9a3A2ACT7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col9a3A2ACT7 Gm5075-201ENSMUST00000196916 622 ntBASIC19.12■□□□□ 0.65
Col9a3A2ACT7 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.12■□□□□ 0.65
Col9a3A2ACT7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col9a3A2ACT7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col9a3A2ACT7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.12■□□□□ 0.65
Col9a3A2ACT7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.12■□□□□ 0.65
Col9a3A2ACT7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Col9a3A2ACT7 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col9a3A2ACT7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col9a3A2ACT7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col9a3A2ACT7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col9a3A2ACT7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col9a3A2ACT7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.11■□□□□ 0.65
Col9a3A2ACT7 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.11■□□□□ 0.65
Col9a3A2ACT7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.11■□□□□ 0.65
Col9a3A2ACT7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col9a3A2ACT7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col9a3A2ACT7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col9a3A2ACT7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col9a3A2ACT7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col9a3A2ACT7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col9a3A2ACT7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col9a3A2ACT7 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col9a3A2ACT7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Col9a3A2ACT7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Col9a3A2ACT7 Gm20049-201ENSMUST00000219950 730 ntBASIC19.1■□□□□ 0.65
Col9a3A2ACT7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col9a3A2ACT7 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col9a3A2ACT7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Col9a3A2ACT7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.1■□□□□ 0.65
Col9a3A2ACT7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.1■□□□□ 0.65
Col9a3A2ACT7 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.1■□□□□ 0.65
Col9a3A2ACT7 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col9a3A2ACT7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col9a3A2ACT7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Col9a3A2ACT7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col9a3A2ACT7 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.09■□□□□ 0.65
Col9a3A2ACT7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col9a3A2ACT7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.09■□□□□ 0.65
Col9a3A2ACT7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col9a3A2ACT7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col9a3A2ACT7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
Col9a3A2ACT7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col9a3A2ACT7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col9a3A2ACT7 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col9a3A2ACT7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col9a3A2ACT7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col9a3A2ACT7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Col9a3A2ACT7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Col9a3A2ACT7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col9a3A2ACT7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.07■□□□□ 0.64
Col9a3A2ACT7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Col9a3A2ACT7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.07■□□□□ 0.64
Col9a3A2ACT7 Gm8520-201ENSMUST00000186517 868 ntBASIC19.07■□□□□ 0.64
Col9a3A2ACT7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col9a3A2ACT7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Col9a3A2ACT7 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.07■□□□□ 0.64
Col9a3A2ACT7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Col9a3A2ACT7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col9a3A2ACT7 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col9a3A2ACT7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col9a3A2ACT7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.06■□□□□ 0.64
Col9a3A2ACT7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col9a3A2ACT7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col9a3A2ACT7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col9a3A2ACT7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col9a3A2ACT7 Gm6211-202ENSMUST00000167849 925 ntBASIC19.06■□□□□ 0.64
Col9a3A2ACT7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col9a3A2ACT7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col9a3A2ACT7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Col9a3A2ACT7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.06■□□□□ 0.64
Col9a3A2ACT7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Col9a3A2ACT7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col9a3A2ACT7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col9a3A2ACT7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col9a3A2ACT7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.05■□□□□ 0.64
Col9a3A2ACT7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col9a3A2ACT7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.05■□□□□ 0.64
Col9a3A2ACT7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col9a3A2ACT7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Col9a3A2ACT7 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col9a3A2ACT7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Col9a3A2ACT7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.05■□□□□ 0.64
Col9a3A2ACT7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col9a3A2ACT7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col9a3A2ACT7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col9a3A2ACT7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col9a3A2ACT7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col9a3A2ACT7 Gm13168-201ENSMUST00000121771 632 ntBASIC19.04■□□□□ 0.64
Col9a3A2ACT7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms