Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lnp1A0A1B0GSK3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lnp1A0A1B0GSK3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lnp1A0A1B0GSK3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Lnp1A0A1B0GSK3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Lnp1A0A1B0GSK3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lnp1A0A1B0GSK3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lnp1A0A1B0GSK3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Lnp1A0A1B0GSK3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lnp1A0A1B0GSK3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lnp1A0A1B0GSK3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Lnp1A0A1B0GSK3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lnp1A0A1B0GSK3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lnp1A0A1B0GSK3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Lnp1A0A1B0GSK3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Lnp1A0A1B0GSK3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lnp1A0A1B0GSK3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lnp1A0A1B0GSK3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.18■□□□□ 0.18
Lnp1A0A1B0GSK3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.18■□□□□ 0.18
Lnp1A0A1B0GSK3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lnp1A0A1B0GSK3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lnp1A0A1B0GSK3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lnp1A0A1B0GSK3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lnp1A0A1B0GSK3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lnp1A0A1B0GSK3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Lnp1A0A1B0GSK3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lnp1A0A1B0GSK3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lnp1A0A1B0GSK3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Lnp1A0A1B0GSK3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Lnp1A0A1B0GSK3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lnp1A0A1B0GSK3 Gm12251-201ENSMUST00000117893 792 ntBASIC16.17■□□□□ 0.18
Lnp1A0A1B0GSK3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lnp1A0A1B0GSK3 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.17■□□□□ 0.18
Lnp1A0A1B0GSK3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lnp1A0A1B0GSK3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lnp1A0A1B0GSK3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.17■□□□□ 0.18
Lnp1A0A1B0GSK3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Lnp1A0A1B0GSK3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Lnp1A0A1B0GSK3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.17■□□□□ 0.18
Lnp1A0A1B0GSK3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Lnp1A0A1B0GSK3 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.16■□□□□ 0.18
Lnp1A0A1B0GSK3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lnp1A0A1B0GSK3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Lnp1A0A1B0GSK3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lnp1A0A1B0GSK3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lnp1A0A1B0GSK3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.16■□□□□ 0.18
Lnp1A0A1B0GSK3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lnp1A0A1B0GSK3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lnp1A0A1B0GSK3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.16■□□□□ 0.18
Lnp1A0A1B0GSK3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lnp1A0A1B0GSK3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lnp1A0A1B0GSK3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.16■□□□□ 0.18
Lnp1A0A1B0GSK3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Lnp1A0A1B0GSK3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lnp1A0A1B0GSK3 Iqck-206ENSMUST00000208658 2891 ntBASIC16.15■□□□□ 0.18
Lnp1A0A1B0GSK3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lnp1A0A1B0GSK3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lnp1A0A1B0GSK3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lnp1A0A1B0GSK3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lnp1A0A1B0GSK3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Lnp1A0A1B0GSK3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lnp1A0A1B0GSK3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lnp1A0A1B0GSK3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Lnp1A0A1B0GSK3 AA386476-201ENSMUST00000098781 1665 ntBASIC16.14■□□□□ 0.18
Lnp1A0A1B0GSK3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lnp1A0A1B0GSK3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lnp1A0A1B0GSK3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.14■□□□□ 0.17
Lnp1A0A1B0GSK3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Lnp1A0A1B0GSK3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lnp1A0A1B0GSK3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Lnp1A0A1B0GSK3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.14■□□□□ 0.17
Lnp1A0A1B0GSK3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lnp1A0A1B0GSK3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.14■□□□□ 0.17
Lnp1A0A1B0GSK3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lnp1A0A1B0GSK3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Lnp1A0A1B0GSK3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lnp1A0A1B0GSK3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lnp1A0A1B0GSK3 Gm27454-201ENSMUST00000185090 204 ntBASIC16.13■□□□□ 0.17
Lnp1A0A1B0GSK3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Lnp1A0A1B0GSK3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lnp1A0A1B0GSK3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.13■□□□□ 0.17
Lnp1A0A1B0GSK3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lnp1A0A1B0GSK3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lnp1A0A1B0GSK3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lnp1A0A1B0GSK3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Lnp1A0A1B0GSK3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lnp1A0A1B0GSK3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lnp1A0A1B0GSK3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lnp1A0A1B0GSK3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.12■□□□□ 0.17
Lnp1A0A1B0GSK3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lnp1A0A1B0GSK3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lnp1A0A1B0GSK3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lnp1A0A1B0GSK3 Spcs1-204ENSMUST00000226782 949 ntBASIC16.12■□□□□ 0.17
Lnp1A0A1B0GSK3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lnp1A0A1B0GSK3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lnp1A0A1B0GSK3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Lnp1A0A1B0GSK3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lnp1A0A1B0GSK3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lnp1A0A1B0GSK3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lnp1A0A1B0GSK3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms