Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Trav17A0A075B655 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav17A0A075B655 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.45■□□□□ 0.06
Trav17A0A075B655 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav17A0A075B655 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav17A0A075B655 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav17A0A075B655 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav17A0A075B655 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav17A0A075B655 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav17A0A075B655 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav17A0A075B655 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav17A0A075B655 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav17A0A075B655 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav17A0A075B655 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trav17A0A075B655 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav17A0A075B655 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.44■□□□□ 0.06
Trav17A0A075B655 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav17A0A075B655 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav17A0A075B655 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav17A0A075B655 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav17A0A075B655 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav17A0A075B655 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.44■□□□□ 0.06
Trav17A0A075B655 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav17A0A075B655 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.43■□□□□ 0.06
Trav17A0A075B655 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav17A0A075B655 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
Trav17A0A075B655 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav17A0A075B655 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav17A0A075B655 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav17A0A075B655 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav17A0A075B655 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav17A0A075B655 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav17A0A075B655 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trav17A0A075B655 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav17A0A075B655 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav17A0A075B655 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav17A0A075B655 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav17A0A075B655 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav17A0A075B655 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav17A0A075B655 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav17A0A075B655 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trav17A0A075B655 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.42■□□□□ 0.06
Trav17A0A075B655 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav17A0A075B655 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav17A0A075B655 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav17A0A075B655 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav17A0A075B655 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav17A0A075B655 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav17A0A075B655 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trav17A0A075B655 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav17A0A075B655 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav17A0A075B655 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav17A0A075B655 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav17A0A075B655 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav17A0A075B655 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav17A0A075B655 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav17A0A075B655 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav17A0A075B655 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Trav17A0A075B655 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav17A0A075B655 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav17A0A075B655 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav17A0A075B655 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav17A0A075B655 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav17A0A075B655 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav17A0A075B655 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Trav17A0A075B655 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav17A0A075B655 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav17A0A075B655 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Trav17A0A075B655 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav17A0A075B655 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav17A0A075B655 Gm5921-201ENSMUST00000075898 882 ntBASIC15.4■□□□□ 0.06
Trav17A0A075B655 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav17A0A075B655 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav17A0A075B655 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav17A0A075B655 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav17A0A075B655 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav17A0A075B655 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav17A0A075B655 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav17A0A075B655 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav17A0A075B655 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav17A0A075B655 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav17A0A075B655 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav17A0A075B655 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav17A0A075B655 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.39■□□□□ 0.05
Trav17A0A075B655 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav17A0A075B655 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.39■□□□□ 0.05
Trav17A0A075B655 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.39■□□□□ 0.05
Trav17A0A075B655 Gm43530-201ENSMUST00000195920 274 ntBASIC15.39■□□□□ 0.05
Trav17A0A075B655 Gm40881-201ENSMUST00000223397 166 ntBASIC15.39■□□□□ 0.05
Trav17A0A075B655 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav17A0A075B655 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav17A0A075B655 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav17A0A075B655 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav17A0A075B655 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav17A0A075B655 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav17A0A075B655 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav17A0A075B655 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav17A0A075B655 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav17A0A075B655 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav17A0A075B655 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms