Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9n-4A0A075B631 Gm10657-201ENSMUST00000193528 1031 ntBASIC13.31□□□□□ -0.28
Trav9n-4A0A075B631 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Trav9n-4A0A075B631 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC13.31□□□□□ -0.28
Trav9n-4A0A075B631 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9n-4A0A075B631 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav9n-4A0A075B631 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav9n-4A0A075B631 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav9n-4A0A075B631 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav9n-4A0A075B631 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9n-4A0A075B631 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC13.31□□□□□ -0.28
Trav9n-4A0A075B631 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9n-4A0A075B631 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC13.31□□□□□ -0.28
Trav9n-4A0A075B631 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav9n-4A0A075B631 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9n-4A0A075B631 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav9n-4A0A075B631 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav9n-4A0A075B631 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9n-4A0A075B631 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9n-4A0A075B631 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav9n-4A0A075B631 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9n-4A0A075B631 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
Trav9n-4A0A075B631 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9n-4A0A075B631 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Trav9n-4A0A075B631 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Trav9n-4A0A075B631 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9n-4A0A075B631 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav9n-4A0A075B631 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Trav9n-4A0A075B631 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9n-4A0A075B631 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trav9n-4A0A075B631 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9n-4A0A075B631 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9n-4A0A075B631 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav9n-4A0A075B631 Cdkn3-203ENSMUST00000227149 1952 ntBASIC13.29□□□□□ -0.28
Trav9n-4A0A075B631 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9n-4A0A075B631 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9n-4A0A075B631 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav9n-4A0A075B631 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9n-4A0A075B631 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Trav9n-4A0A075B631 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9n-4A0A075B631 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9n-4A0A075B631 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9n-4A0A075B631 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9n-4A0A075B631 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9n-4A0A075B631 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9n-4A0A075B631 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9n-4A0A075B631 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9n-4A0A075B631 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9n-4A0A075B631 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9n-4A0A075B631 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9n-4A0A075B631 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9n-4A0A075B631 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav9n-4A0A075B631 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9n-4A0A075B631 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Trav9n-4A0A075B631 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9n-4A0A075B631 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9n-4A0A075B631 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9n-4A0A075B631 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9n-4A0A075B631 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav9n-4A0A075B631 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav9n-4A0A075B631 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9n-4A0A075B631 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9n-4A0A075B631 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav9n-4A0A075B631 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Trav9n-4A0A075B631 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9n-4A0A075B631 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9n-4A0A075B631 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9n-4A0A075B631 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav9n-4A0A075B631 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Trav9n-4A0A075B631 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trav9n-4A0A075B631 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav9n-4A0A075B631 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9n-4A0A075B631 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9n-4A0A075B631 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9n-4A0A075B631 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9n-4A0A075B631 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav9n-4A0A075B631 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9n-4A0A075B631 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Trav9n-4A0A075B631 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9n-4A0A075B631 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9n-4A0A075B631 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9n-4A0A075B631 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9n-4A0A075B631 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav9n-4A0A075B631 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Trav9n-4A0A075B631 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav9n-4A0A075B631 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9n-4A0A075B631 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9n-4A0A075B631 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9n-4A0A075B631 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav9n-4A0A075B631 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav9n-4A0A075B631 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9n-4A0A075B631 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav9n-4A0A075B631 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9n-4A0A075B631 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9n-4A0A075B631 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC13.26□□□□□ -0.29
Trav9n-4A0A075B631 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav9n-4A0A075B631 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9n-4A0A075B631 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9n-4A0A075B631 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Trav9n-4A0A075B631 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms