Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.04■□□□□ 0.8
Col4a4Q9QZR9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a4Q9QZR9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a4Q9QZR9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a4Q9QZR9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a4Q9QZR9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Col4a4Q9QZR9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a4Q9QZR9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.03■□□□□ 0.8
Col4a4Q9QZR9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a4Q9QZR9 Gm11643-201ENSMUST00000119578 864 ntBASIC20.03■□□□□ 0.8
Col4a4Q9QZR9 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.03■□□□□ 0.8
Col4a4Q9QZR9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a4Q9QZR9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a4Q9QZR9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a4Q9QZR9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a4Q9QZR9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a4Q9QZR9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a4Q9QZR9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.02■□□□□ 0.8
Col4a4Q9QZR9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a4Q9QZR9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.02■□□□□ 0.8
Col4a4Q9QZR9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a4Q9QZR9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Col4a4Q9QZR9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Col4a4Q9QZR9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Col4a4Q9QZR9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Col4a4Q9QZR9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.01■□□□□ 0.79
Col4a4Q9QZR9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Col4a4Q9QZR9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Col4a4Q9QZR9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Col4a4Q9QZR9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.01■□□□□ 0.79
Col4a4Q9QZR9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a4Q9QZR9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a4Q9QZR9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Col4a4Q9QZR9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a4Q9QZR9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20■□□□□ 0.79
Col4a4Q9QZR9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col4a4Q9QZR9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a4Q9QZR9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a4Q9QZR9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col4a4Q9QZR9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20■□□□□ 0.79
Col4a4Q9QZR9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a4Q9QZR9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a4Q9QZR9 Il17rd-202ENSMUST00000223942 2186 ntBASIC20■□□□□ 0.79
Col4a4Q9QZR9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a4Q9QZR9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20■□□□□ 0.79
Col4a4Q9QZR9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a4Q9QZR9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.99■□□□□ 0.79
Col4a4Q9QZR9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a4Q9QZR9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a4Q9QZR9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.99■□□□□ 0.79
Col4a4Q9QZR9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a4Q9QZR9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a4Q9QZR9 Gm10698-201ENSMUST00000182663 604 ntBASIC19.99■□□□□ 0.79
Col4a4Q9QZR9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.99■□□□□ 0.79
Col4a4Q9QZR9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a4Q9QZR9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a4Q9QZR9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a4Q9QZR9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.98■□□□□ 0.79
Col4a4Q9QZR9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.98■□□□□ 0.79
Col4a4Q9QZR9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a4Q9QZR9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.98■□□□□ 0.79
Col4a4Q9QZR9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a4Q9QZR9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a4Q9QZR9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a4Q9QZR9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a4Q9QZR9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a4Q9QZR9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a4Q9QZR9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a4Q9QZR9 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.98■□□□□ 0.79
Col4a4Q9QZR9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a4Q9QZR9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a4Q9QZR9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Col4a4Q9QZR9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Col4a4Q9QZR9 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.97■□□□□ 0.79
Col4a4Q9QZR9 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.97■□□□□ 0.79
Col4a4Q9QZR9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.97■□□□□ 0.79
Col4a4Q9QZR9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Col4a4Q9QZR9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Col4a4Q9QZR9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a4Q9QZR9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.97■□□□□ 0.79
Col4a4Q9QZR9 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.97■□□□□ 0.79
Col4a4Q9QZR9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a4Q9QZR9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Col4a4Q9QZR9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a4Q9QZR9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a4Q9QZR9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.96■□□□□ 0.79
Col4a4Q9QZR9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a4Q9QZR9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a4Q9QZR9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Col4a4Q9QZR9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.79
Col4a4Q9QZR9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a4Q9QZR9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.95■□□□□ 0.78
Col4a4Q9QZR9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.95■□□□□ 0.78
Col4a4Q9QZR9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a4Q9QZR9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a4Q9QZR9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a4Q9QZR9 Dio3-201ENSMUST00000097228 1449 ntBASIC19.95■□□□□ 0.78
Col4a4Q9QZR9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a4Q9QZR9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a4Q9QZR9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms