Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Fam228aQ8CDW1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Fam228aQ8CDW1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Fam228aQ8CDW1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam228aQ8CDW1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Fam228aQ8CDW1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam228aQ8CDW1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.48■□□□□ 0.87
Fam228aQ8CDW1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Fam228aQ8CDW1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Fam228aQ8CDW1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Fam228aQ8CDW1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Fam228aQ8CDW1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Fam228aQ8CDW1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Fam228aQ8CDW1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Fam228aQ8CDW1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Fam228aQ8CDW1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Fam228aQ8CDW1 Gm43530-201ENSMUST00000195920 274 ntBASIC20.47■□□□□ 0.87
Fam228aQ8CDW1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Fam228aQ8CDW1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Fam228aQ8CDW1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Fam228aQ8CDW1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Fam228aQ8CDW1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Fam228aQ8CDW1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.47■□□□□ 0.87
Fam228aQ8CDW1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Fam228aQ8CDW1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Fam228aQ8CDW1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Fam228aQ8CDW1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Fam228aQ8CDW1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.47■□□□□ 0.87
Fam228aQ8CDW1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Fam228aQ8CDW1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Fam228aQ8CDW1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Fam228aQ8CDW1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Fam228aQ8CDW1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Fam228aQ8CDW1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.46■□□□□ 0.87
Fam228aQ8CDW1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Fam228aQ8CDW1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.46■□□□□ 0.87
Fam228aQ8CDW1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Fam228aQ8CDW1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Fam228aQ8CDW1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Fam228aQ8CDW1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Fam228aQ8CDW1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.45■□□□□ 0.87
Fam228aQ8CDW1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Fam228aQ8CDW1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Fam228aQ8CDW1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Fam228aQ8CDW1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Fam228aQ8CDW1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Fam228aQ8CDW1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Fam228aQ8CDW1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Fam228aQ8CDW1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Fam228aQ8CDW1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.44■□□□□ 0.86
Fam228aQ8CDW1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Fam228aQ8CDW1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Fam228aQ8CDW1 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.44■□□□□ 0.86
Fam228aQ8CDW1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.44■□□□□ 0.86
Fam228aQ8CDW1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Fam228aQ8CDW1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Fam228aQ8CDW1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Fam228aQ8CDW1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Fam228aQ8CDW1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Fam228aQ8CDW1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Fam228aQ8CDW1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Fam228aQ8CDW1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Fam228aQ8CDW1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.43■□□□□ 0.86
Fam228aQ8CDW1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Fam228aQ8CDW1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Fam228aQ8CDW1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Fam228aQ8CDW1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.43■□□□□ 0.86
Fam228aQ8CDW1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Fam228aQ8CDW1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Fam228aQ8CDW1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Fam228aQ8CDW1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Fam228aQ8CDW1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Fam228aQ8CDW1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Fam228aQ8CDW1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Fam228aQ8CDW1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Fam228aQ8CDW1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Fam228aQ8CDW1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Fam228aQ8CDW1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Fam228aQ8CDW1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.42■□□□□ 0.86
Fam228aQ8CDW1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Fam228aQ8CDW1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Fam228aQ8CDW1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Fam228aQ8CDW1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Fam228aQ8CDW1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Fam228aQ8CDW1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Fam228aQ8CDW1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Fam228aQ8CDW1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Fam228aQ8CDW1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Fam228aQ8CDW1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Fam228aQ8CDW1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.41■□□□□ 0.86
Fam228aQ8CDW1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Fam228aQ8CDW1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Fam228aQ8CDW1 Gm9870-201ENSMUST00000063874 645 ntBASIC20.41■□□□□ 0.86
Fam228aQ8CDW1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Fam228aQ8CDW1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Fam228aQ8CDW1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.4■□□□□ 0.86
Fam228aQ8CDW1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Fam228aQ8CDW1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Fam228aQ8CDW1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Fam228aQ8CDW1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms