Protein–RNA interactions for Protein: Q8BGA5

Krr1, KRR1 small subunit processome component homolog, mousemouse

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krr1Q8BGA5 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Krr1Q8BGA5 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Krr1Q8BGA5 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Krr1Q8BGA5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Krr1Q8BGA5 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Krr1Q8BGA5 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Krr1Q8BGA5 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Krr1Q8BGA5 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Krr1Q8BGA5 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.39■□□□□ 0.53
Krr1Q8BGA5 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Krr1Q8BGA5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Krr1Q8BGA5 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Krr1Q8BGA5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.39■□□□□ 0.53
Krr1Q8BGA5 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Krr1Q8BGA5 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Krr1Q8BGA5 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Krr1Q8BGA5 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Krr1Q8BGA5 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Krr1Q8BGA5 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Krr1Q8BGA5 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Krr1Q8BGA5 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Krr1Q8BGA5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Krr1Q8BGA5 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Krr1Q8BGA5 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Krr1Q8BGA5 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Krr1Q8BGA5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Krr1Q8BGA5 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Krr1Q8BGA5 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Krr1Q8BGA5 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Krr1Q8BGA5 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krr1Q8BGA5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krr1Q8BGA5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krr1Q8BGA5 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krr1Q8BGA5 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Krr1Q8BGA5 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krr1Q8BGA5 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krr1Q8BGA5 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krr1Q8BGA5 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Krr1Q8BGA5 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Krr1Q8BGA5 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.36■□□□□ 0.53
Krr1Q8BGA5 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.36■□□□□ 0.53
Krr1Q8BGA5 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.36■□□□□ 0.53
Krr1Q8BGA5 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.36■□□□□ 0.53
Krr1Q8BGA5 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Krr1Q8BGA5 Gm9959-201ENSMUST00000068277 390 ntBASIC18.36■□□□□ 0.53
Krr1Q8BGA5 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Krr1Q8BGA5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Krr1Q8BGA5 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.35■□□□□ 0.53
Krr1Q8BGA5 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krr1Q8BGA5 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krr1Q8BGA5 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krr1Q8BGA5 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krr1Q8BGA5 Gm9870-201ENSMUST00000063874 645 ntBASIC18.35■□□□□ 0.53
Krr1Q8BGA5 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krr1Q8BGA5 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Krr1Q8BGA5 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krr1Q8BGA5 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Krr1Q8BGA5 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Krr1Q8BGA5 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krr1Q8BGA5 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.34■□□□□ 0.53
Krr1Q8BGA5 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krr1Q8BGA5 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.34■□□□□ 0.53
Krr1Q8BGA5 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krr1Q8BGA5 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krr1Q8BGA5 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Krr1Q8BGA5 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Krr1Q8BGA5 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Krr1Q8BGA5 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Krr1Q8BGA5 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Krr1Q8BGA5 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Krr1Q8BGA5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Krr1Q8BGA5 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.33■□□□□ 0.52
Krr1Q8BGA5 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Krr1Q8BGA5 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Krr1Q8BGA5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Krr1Q8BGA5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Krr1Q8BGA5 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
Krr1Q8BGA5 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.32■□□□□ 0.52
Krr1Q8BGA5 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Krr1Q8BGA5 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Krr1Q8BGA5 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.32■□□□□ 0.52
Krr1Q8BGA5 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Krr1Q8BGA5 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Krr1Q8BGA5 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Krr1Q8BGA5 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.32■□□□□ 0.52
Krr1Q8BGA5 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.32■□□□□ 0.52
Krr1Q8BGA5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Krr1Q8BGA5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Krr1Q8BGA5 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Krr1Q8BGA5 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Krr1Q8BGA5 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Krr1Q8BGA5 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Krr1Q8BGA5 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.31■□□□□ 0.52
Krr1Q8BGA5 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Krr1Q8BGA5 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Krr1Q8BGA5 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Krr1Q8BGA5 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Krr1Q8BGA5 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Krr1Q8BGA5 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Krr1Q8BGA5 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 330.9 ms