Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp6nlQ80XC3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Usp6nlQ80XC3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.66■■□□□ 1.06
Usp6nlQ80XC3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp6nlQ80XC3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp6nlQ80XC3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Usp6nlQ80XC3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp6nlQ80XC3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Usp6nlQ80XC3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Usp6nlQ80XC3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp6nlQ80XC3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Usp6nlQ80XC3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Usp6nlQ80XC3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp6nlQ80XC3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp6nlQ80XC3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Usp6nlQ80XC3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Usp6nlQ80XC3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Usp6nlQ80XC3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp6nlQ80XC3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp6nlQ80XC3 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.65■■□□□ 1.06
Usp6nlQ80XC3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Usp6nlQ80XC3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Usp6nlQ80XC3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
Usp6nlQ80XC3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Usp6nlQ80XC3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Usp6nlQ80XC3 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.64■■□□□ 1.05
Usp6nlQ80XC3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Usp6nlQ80XC3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.64■■□□□ 1.05
Usp6nlQ80XC3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Usp6nlQ80XC3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Usp6nlQ80XC3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Usp6nlQ80XC3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp6nlQ80XC3 Gm13148-201ENSMUST00000118892 745 ntBASIC21.63■■□□□ 1.05
Usp6nlQ80XC3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.63■■□□□ 1.05
Usp6nlQ80XC3 Gm38205-201ENSMUST00000192243 258 ntBASIC21.63■■□□□ 1.05
Usp6nlQ80XC3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.63■■□□□ 1.05
Usp6nlQ80XC3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Usp6nlQ80XC3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Usp6nlQ80XC3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp6nlQ80XC3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Usp6nlQ80XC3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Usp6nlQ80XC3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Usp6nlQ80XC3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Usp6nlQ80XC3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Usp6nlQ80XC3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Usp6nlQ80XC3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.62■■□□□ 1.05
Usp6nlQ80XC3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Usp6nlQ80XC3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
Usp6nlQ80XC3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Usp6nlQ80XC3 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.62■■□□□ 1.05
Usp6nlQ80XC3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Usp6nlQ80XC3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.62■■□□□ 1.05
Usp6nlQ80XC3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Usp6nlQ80XC3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Usp6nlQ80XC3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
Usp6nlQ80XC3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.61■■□□□ 1.05
Usp6nlQ80XC3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Usp6nlQ80XC3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Usp6nlQ80XC3 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.61■■□□□ 1.05
Usp6nlQ80XC3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Usp6nlQ80XC3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Usp6nlQ80XC3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Usp6nlQ80XC3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Usp6nlQ80XC3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Usp6nlQ80XC3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Usp6nlQ80XC3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Usp6nlQ80XC3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.6■■□□□ 1.05
Usp6nlQ80XC3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
Usp6nlQ80XC3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Usp6nlQ80XC3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Usp6nlQ80XC3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Usp6nlQ80XC3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.6■■□□□ 1.05
Usp6nlQ80XC3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Usp6nlQ80XC3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Usp6nlQ80XC3 Gm7290-201ENSMUST00000104990 617 ntBASIC21.59■■□□□ 1.05
Usp6nlQ80XC3 Gm12527-201ENSMUST00000117967 564 ntBASIC21.59■■□□□ 1.05
Usp6nlQ80XC3 Gm12918-201ENSMUST00000120234 636 ntBASIC21.59■■□□□ 1.05
Usp6nlQ80XC3 Gm15710-201ENSMUST00000121821 636 ntBASIC21.59■■□□□ 1.05
Usp6nlQ80XC3 Gm5075-201ENSMUST00000196916 622 ntBASIC21.59■■□□□ 1.05
Usp6nlQ80XC3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.59■■□□□ 1.05
Usp6nlQ80XC3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.59■■□□□ 1.05
Usp6nlQ80XC3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.59■■□□□ 1.05
Usp6nlQ80XC3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Usp6nlQ80XC3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Usp6nlQ80XC3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Usp6nlQ80XC3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Usp6nlQ80XC3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Usp6nlQ80XC3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Usp6nlQ80XC3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Usp6nlQ80XC3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Usp6nlQ80XC3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.58■■□□□ 1.05
Usp6nlQ80XC3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Usp6nlQ80XC3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Usp6nlQ80XC3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Usp6nlQ80XC3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Usp6nlQ80XC3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.04
Usp6nlQ80XC3 Gm13534-201ENSMUST00000121169 513 ntBASIC21.57■■□□□ 1.04
Usp6nlQ80XC3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Usp6nlQ80XC3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Usp6nlQ80XC3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms