Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clns1aQ61189 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Clns1aQ61189 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Clns1aQ61189 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Clns1aQ61189 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clns1aQ61189 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clns1aQ61189 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.68■□□□□ 0.26
Clns1aQ61189 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.68■□□□□ 0.26
Clns1aQ61189 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.68■□□□□ 0.26
Clns1aQ61189 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clns1aQ61189 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clns1aQ61189 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clns1aQ61189 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Clns1aQ61189 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clns1aQ61189 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Clns1aQ61189 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Clns1aQ61189 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.67■□□□□ 0.26
Clns1aQ61189 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clns1aQ61189 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clns1aQ61189 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clns1aQ61189 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clns1aQ61189 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clns1aQ61189 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clns1aQ61189 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clns1aQ61189 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clns1aQ61189 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clns1aQ61189 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clns1aQ61189 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Clns1aQ61189 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clns1aQ61189 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clns1aQ61189 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.66■□□□□ 0.26
Clns1aQ61189 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clns1aQ61189 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clns1aQ61189 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clns1aQ61189 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Clns1aQ61189 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clns1aQ61189 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clns1aQ61189 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clns1aQ61189 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Clns1aQ61189 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clns1aQ61189 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Clns1aQ61189 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clns1aQ61189 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clns1aQ61189 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clns1aQ61189 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clns1aQ61189 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clns1aQ61189 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Clns1aQ61189 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Clns1aQ61189 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clns1aQ61189 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Clns1aQ61189 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clns1aQ61189 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clns1aQ61189 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Clns1aQ61189 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clns1aQ61189 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clns1aQ61189 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Clns1aQ61189 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clns1aQ61189 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clns1aQ61189 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clns1aQ61189 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clns1aQ61189 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clns1aQ61189 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clns1aQ61189 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Clns1aQ61189 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clns1aQ61189 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clns1aQ61189 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clns1aQ61189 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.63■□□□□ 0.25
Clns1aQ61189 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Clns1aQ61189 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clns1aQ61189 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clns1aQ61189 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clns1aQ61189 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clns1aQ61189 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.63■□□□□ 0.25
Clns1aQ61189 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clns1aQ61189 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clns1aQ61189 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clns1aQ61189 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clns1aQ61189 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clns1aQ61189 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clns1aQ61189 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Clns1aQ61189 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clns1aQ61189 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Clns1aQ61189 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clns1aQ61189 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clns1aQ61189 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clns1aQ61189 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clns1aQ61189 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Clns1aQ61189 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clns1aQ61189 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clns1aQ61189 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clns1aQ61189 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clns1aQ61189 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clns1aQ61189 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Clns1aQ61189 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clns1aQ61189 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clns1aQ61189 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clns1aQ61189 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Clns1aQ61189 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clns1aQ61189 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clns1aQ61189 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms