Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Znf235Q61116 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.67■□□□□ 0.9
Znf235Q61116 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Znf235Q61116 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Znf235Q61116 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Znf235Q61116 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Znf235Q61116 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Znf235Q61116 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Znf235Q61116 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Znf235Q61116 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Znf235Q61116 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Znf235Q61116 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Znf235Q61116 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Znf235Q61116 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Znf235Q61116 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Znf235Q61116 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Znf235Q61116 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Znf235Q61116 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Znf235Q61116 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Znf235Q61116 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Znf235Q61116 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.65■□□□□ 0.9
Znf235Q61116 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Znf235Q61116 Gm29257-201ENSMUST00000186115 639 ntBASIC20.65■□□□□ 0.9
Znf235Q61116 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Znf235Q61116 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Znf235Q61116 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Znf235Q61116 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Znf235Q61116 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.64■□□□□ 0.89
Znf235Q61116 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.64■□□□□ 0.89
Znf235Q61116 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.64■□□□□ 0.89
Znf235Q61116 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Znf235Q61116 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Znf235Q61116 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.64■□□□□ 0.89
Znf235Q61116 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Znf235Q61116 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Znf235Q61116 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.63■□□□□ 0.89
Znf235Q61116 Gm13146-201ENSMUST00000118508 780 ntBASIC20.63■□□□□ 0.89
Znf235Q61116 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Znf235Q61116 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Znf235Q61116 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.63■□□□□ 0.89
Znf235Q61116 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Znf235Q61116 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Znf235Q61116 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.63■□□□□ 0.89
Znf235Q61116 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.63■□□□□ 0.89
Znf235Q61116 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Znf235Q61116 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Znf235Q61116 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.62■□□□□ 0.89
Znf235Q61116 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Znf235Q61116 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Znf235Q61116 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Znf235Q61116 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Znf235Q61116 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Znf235Q61116 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.61■□□□□ 0.89
Znf235Q61116 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Znf235Q61116 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Znf235Q61116 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Znf235Q61116 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
Znf235Q61116 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Znf235Q61116 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.61■□□□□ 0.89
Znf235Q61116 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Znf235Q61116 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Znf235Q61116 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.6■□□□□ 0.89
Znf235Q61116 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Znf235Q61116 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Znf235Q61116 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Znf235Q61116 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Znf235Q61116 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Znf235Q61116 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Znf235Q61116 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Znf235Q61116 Gm38205-201ENSMUST00000192243 258 ntBASIC20.59■□□□□ 0.89
Znf235Q61116 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.59■□□□□ 0.89
Znf235Q61116 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.59■□□□□ 0.89
Znf235Q61116 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Znf235Q61116 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.59■□□□□ 0.89
Znf235Q61116 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Znf235Q61116 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.58■□□□□ 0.89
Znf235Q61116 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Znf235Q61116 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Znf235Q61116 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Znf235Q61116 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Znf235Q61116 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Znf235Q61116 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Znf235Q61116 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Znf235Q61116 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Znf235Q61116 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.57■□□□□ 0.88
Znf235Q61116 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.57■□□□□ 0.88
Znf235Q61116 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Znf235Q61116 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.56■□□□□ 0.88
Znf235Q61116 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Znf235Q61116 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Znf235Q61116 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Znf235Q61116 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Znf235Q61116 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Znf235Q61116 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Znf235Q61116 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Znf235Q61116 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Znf235Q61116 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Znf235Q61116 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Znf235Q61116 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Znf235Q61116 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms