Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Uspl1Q3ULM6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
Uspl1Q3ULM6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Uspl1Q3ULM6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Uspl1Q3ULM6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Uspl1Q3ULM6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Uspl1Q3ULM6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC25.43■■□□□ 1.66
Uspl1Q3ULM6 Gm40848-201ENSMUST00000221998 324 ntBASIC25.43■■□□□ 1.66
Uspl1Q3ULM6 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Uspl1Q3ULM6 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Uspl1Q3ULM6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Uspl1Q3ULM6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Uspl1Q3ULM6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Uspl1Q3ULM6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Uspl1Q3ULM6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Uspl1Q3ULM6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Uspl1Q3ULM6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC25.42■■□□□ 1.66
Uspl1Q3ULM6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Uspl1Q3ULM6 Notumos-201ENSMUST00000151998 2659 ntBASIC25.41■■□□□ 1.66
Uspl1Q3ULM6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Uspl1Q3ULM6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC25.41■■□□□ 1.66
Uspl1Q3ULM6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Uspl1Q3ULM6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Uspl1Q3ULM6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
Uspl1Q3ULM6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Uspl1Q3ULM6 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC25.41■■□□□ 1.66
Uspl1Q3ULM6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Uspl1Q3ULM6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Uspl1Q3ULM6 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Uspl1Q3ULM6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Uspl1Q3ULM6 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC25.4■■□□□ 1.66
Uspl1Q3ULM6 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Uspl1Q3ULM6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Uspl1Q3ULM6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
Uspl1Q3ULM6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Uspl1Q3ULM6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC25.39■■□□□ 1.66
Uspl1Q3ULM6 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC25.39■■□□□ 1.66
Uspl1Q3ULM6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Uspl1Q3ULM6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Uspl1Q3ULM6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
Uspl1Q3ULM6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC25.39■■□□□ 1.66
Uspl1Q3ULM6 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC25.39■■□□□ 1.66
Uspl1Q3ULM6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC25.39■■□□□ 1.65
Uspl1Q3ULM6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Uspl1Q3ULM6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Uspl1Q3ULM6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Uspl1Q3ULM6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC25.38■■□□□ 1.65
Uspl1Q3ULM6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Uspl1Q3ULM6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Uspl1Q3ULM6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
Uspl1Q3ULM6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
Uspl1Q3ULM6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
Uspl1Q3ULM6 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC25.37■■□□□ 1.65
Uspl1Q3ULM6 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
Uspl1Q3ULM6 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Uspl1Q3ULM6 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Uspl1Q3ULM6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
Uspl1Q3ULM6 Golph3-202ENSMUST00000226517 2359 ntBASIC25.36■■□□□ 1.65
Uspl1Q3ULM6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Uspl1Q3ULM6 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
Uspl1Q3ULM6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
Uspl1Q3ULM6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC25.36■■□□□ 1.65
Uspl1Q3ULM6 Gm43060-201ENSMUST00000200621 289 ntBASIC25.36■■□□□ 1.65
Uspl1Q3ULM6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Uspl1Q3ULM6 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Uspl1Q3ULM6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Uspl1Q3ULM6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
Uspl1Q3ULM6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Uspl1Q3ULM6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
Uspl1Q3ULM6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
Uspl1Q3ULM6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Uspl1Q3ULM6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Uspl1Q3ULM6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Uspl1Q3ULM6 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Uspl1Q3ULM6 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Uspl1Q3ULM6 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC25.34■■□□□ 1.65
Uspl1Q3ULM6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Uspl1Q3ULM6 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Uspl1Q3ULM6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Uspl1Q3ULM6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Uspl1Q3ULM6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Uspl1Q3ULM6 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC25.34■■□□□ 1.65
Uspl1Q3ULM6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Uspl1Q3ULM6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
Uspl1Q3ULM6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Uspl1Q3ULM6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Uspl1Q3ULM6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC25.33■■□□□ 1.65
Uspl1Q3ULM6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Uspl1Q3ULM6 Hsf1-204ENSMUST00000226872 2104 ntBASIC25.33■■□□□ 1.64
Uspl1Q3ULM6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC25.32■■□□□ 1.64
Uspl1Q3ULM6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Uspl1Q3ULM6 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC25.32■■□□□ 1.64
Uspl1Q3ULM6 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Uspl1Q3ULM6 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Uspl1Q3ULM6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Uspl1Q3ULM6 Gm20634-201ENSMUST00000090779 2956 ntBASIC25.32■■□□□ 1.64
Uspl1Q3ULM6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Uspl1Q3ULM6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC25.32■■□□□ 1.64
Uspl1Q3ULM6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Uspl1Q3ULM6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms